Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SgcdP82347 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.65■□□□□ 0.26
SgcdP82347 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SgcdP82347 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SgcdP82347 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SgcdP82347 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SgcdP82347 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SgcdP82347 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SgcdP82347 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SgcdP82347 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SgcdP82347 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SgcdP82347 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SgcdP82347 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SgcdP82347 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SgcdP82347 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcdP82347 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcdP82347 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcdP82347 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
SgcdP82347 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcdP82347 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcdP82347 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
SgcdP82347 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
SgcdP82347 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SgcdP82347 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcdP82347 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SgcdP82347 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcdP82347 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SgcdP82347 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SgcdP82347 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcdP82347 Gm37179-201ENSMUST00000194862 823 ntBASIC16.63■□□□□ 0.25
SgcdP82347 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SgcdP82347 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcdP82347 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcdP82347 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcdP82347 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcdP82347 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcdP82347 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcdP82347 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcdP82347 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SgcdP82347 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcdP82347 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcdP82347 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SgcdP82347 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcdP82347 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SgcdP82347 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcdP82347 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcdP82347 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcdP82347 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.62■□□□□ 0.25
SgcdP82347 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SgcdP82347 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.62■□□□□ 0.25
SgcdP82347 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcdP82347 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SgcdP82347 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SgcdP82347 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcdP82347 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SgcdP82347 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcdP82347 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcdP82347 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SgcdP82347 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcdP82347 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcdP82347 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SgcdP82347 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcdP82347 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcdP82347 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcdP82347 Gm42778-201ENSMUST00000199644 553 ntBASIC16.61■□□□□ 0.25
SgcdP82347 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcdP82347 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcdP82347 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcdP82347 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcdP82347 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcdP82347 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcdP82347 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcdP82347 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SgcdP82347 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcdP82347 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SgcdP82347 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SgcdP82347 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcdP82347 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SgcdP82347 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SgcdP82347 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcdP82347 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcdP82347 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SgcdP82347 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcdP82347 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcdP82347 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.6■□□□□ 0.25
SgcdP82347 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SgcdP82347 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SgcdP82347 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SgcdP82347 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcdP82347 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcdP82347 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcdP82347 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcdP82347 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcdP82347 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SgcdP82347 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcdP82347 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcdP82347 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcdP82347 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SgcdP82347 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcdP82347 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms