Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CiitaP79621 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CiitaP79621 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CiitaP79621 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CiitaP79621 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CiitaP79621 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CiitaP79621 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CiitaP79621 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CiitaP79621 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CiitaP79621 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CiitaP79621 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CiitaP79621 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CiitaP79621 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CiitaP79621 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CiitaP79621 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CiitaP79621 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CiitaP79621 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CiitaP79621 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.53■□□□□ 0.72
CiitaP79621 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CiitaP79621 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.53■□□□□ 0.72
CiitaP79621 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CiitaP79621 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CiitaP79621 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CiitaP79621 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CiitaP79621 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.52■□□□□ 0.72
CiitaP79621 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CiitaP79621 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.52■□□□□ 0.72
CiitaP79621 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.52■□□□□ 0.72
CiitaP79621 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CiitaP79621 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CiitaP79621 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CiitaP79621 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CiitaP79621 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.52■□□□□ 0.72
CiitaP79621 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CiitaP79621 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CiitaP79621 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CiitaP79621 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CiitaP79621 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CiitaP79621 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CiitaP79621 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CiitaP79621 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CiitaP79621 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.51■□□□□ 0.71
CiitaP79621 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.51■□□□□ 0.71
CiitaP79621 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CiitaP79621 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.51■□□□□ 0.71
CiitaP79621 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CiitaP79621 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CiitaP79621 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CiitaP79621 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CiitaP79621 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CiitaP79621 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CiitaP79621 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CiitaP79621 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CiitaP79621 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.5■□□□□ 0.71
CiitaP79621 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.5■□□□□ 0.71
CiitaP79621 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.5■□□□□ 0.71
CiitaP79621 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CiitaP79621 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CiitaP79621 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CiitaP79621 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CiitaP79621 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CiitaP79621 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CiitaP79621 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CiitaP79621 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CiitaP79621 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CiitaP79621 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CiitaP79621 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CiitaP79621 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.49■□□□□ 0.71
CiitaP79621 Mir5122-201ENSMUST00000175004 89 ntBASIC19.49■□□□□ 0.71
CiitaP79621 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CiitaP79621 Mir6982-201ENSMUST00000184354 68 ntBASIC19.49■□□□□ 0.71
CiitaP79621 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.49■□□□□ 0.71
CiitaP79621 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.49■□□□□ 0.71
CiitaP79621 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CiitaP79621 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CiitaP79621 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CiitaP79621 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CiitaP79621 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CiitaP79621 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CiitaP79621 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CiitaP79621 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.48■□□□□ 0.71
CiitaP79621 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CiitaP79621 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CiitaP79621 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CiitaP79621 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CiitaP79621 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CiitaP79621 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CiitaP79621 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CiitaP79621 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
CiitaP79621 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.48■□□□□ 0.71
CiitaP79621 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CiitaP79621 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CiitaP79621 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.47■□□□□ 0.71
CiitaP79621 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CiitaP79621 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CiitaP79621 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CiitaP79621 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CiitaP79621 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CiitaP79621 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CiitaP79621 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms