Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ybx1P62960 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ybx1P62960 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Ybx1P62960 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ybx1P62960 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ybx1P62960 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ybx1P62960 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ybx1P62960 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ybx1P62960 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ybx1P62960 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ybx1P62960 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ybx1P62960 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.48■□□□□ 0.55
Ybx1P62960 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ybx1P62960 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ybx1P62960 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ybx1P62960 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ybx1P62960 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ybx1P62960 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.48■□□□□ 0.55
Ybx1P62960 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ybx1P62960 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ybx1P62960 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ybx1P62960 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ybx1P62960 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.48■□□□□ 0.55
Ybx1P62960 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ybx1P62960 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ybx1P62960 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ybx1P62960 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ybx1P62960 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ybx1P62960 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ybx1P62960 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ybx1P62960 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ybx1P62960 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ybx1P62960 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ybx1P62960 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ybx1P62960 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ybx1P62960 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ybx1P62960 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.47■□□□□ 0.55
Ybx1P62960 Mir6349-201ENSMUST00000184059 97 ntBASIC18.47■□□□□ 0.55
Ybx1P62960 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.47■□□□□ 0.55
Ybx1P62960 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ybx1P62960 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.47■□□□□ 0.55
Ybx1P62960 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ybx1P62960 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ybx1P62960 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ybx1P62960 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ybx1P62960 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ybx1P62960 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ybx1P62960 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Ybx1P62960 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ybx1P62960 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ybx1P62960 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.47■□□□□ 0.55
Ybx1P62960 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ybx1P62960 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ybx1P62960 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ybx1P62960 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ybx1P62960 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ybx1P62960 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ybx1P62960 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ybx1P62960 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ybx1P62960 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ybx1P62960 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ybx1P62960 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ybx1P62960 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ybx1P62960 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ybx1P62960 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ybx1P62960 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.46■□□□□ 0.55
Ybx1P62960 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.46■□□□□ 0.55
Ybx1P62960 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.46■□□□□ 0.55
Ybx1P62960 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ybx1P62960 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ybx1P62960 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ybx1P62960 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ybx1P62960 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ybx1P62960 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Ybx1P62960 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ybx1P62960 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ybx1P62960 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.45■□□□□ 0.54
Ybx1P62960 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ybx1P62960 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ybx1P62960 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ybx1P62960 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ybx1P62960 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
Ybx1P62960 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ybx1P62960 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ybx1P62960 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ybx1P62960 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ybx1P62960 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ybx1P62960 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ybx1P62960 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ybx1P62960 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.44■□□□□ 0.54
Ybx1P62960 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.44■□□□□ 0.54
Ybx1P62960 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ybx1P62960 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Ybx1P62960 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ybx1P62960 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ybx1P62960 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ybx1P62960 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ybx1P62960 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ybx1P62960 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.43■□□□□ 0.54
Ybx1P62960 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms