Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Msh6P54276 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Msh6P54276 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Msh6P54276 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Msh6P54276 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Msh6P54276 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Msh6P54276 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Msh6P54276 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Msh6P54276 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Msh6P54276 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.27
Msh6P54276 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC22.95■■□□□ 1.27
Msh6P54276 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Msh6P54276 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC22.95■■□□□ 1.26
Msh6P54276 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Msh6P54276 AC166341.7-201ENSMUST00000221698 126 ntBASIC22.95■■□□□ 1.26
Msh6P54276 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Msh6P54276 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Msh6P54276 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Msh6P54276 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Msh6P54276 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Msh6P54276 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Msh6P54276 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Msh6P54276 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Msh6P54276 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Msh6P54276 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Msh6P54276 Gm6627-201ENSMUST00000218299 2386 ntBASIC22.94■■□□□ 1.26
Msh6P54276 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Msh6P54276 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Msh6P54276 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Msh6P54276 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Msh6P54276 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Msh6P54276 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Msh6P54276 Tgds-204ENSMUST00000228543 1594 ntBASIC22.93■■□□□ 1.26
Msh6P54276 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Msh6P54276 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Msh6P54276 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Msh6P54276 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Msh6P54276 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Msh6P54276 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Msh6P54276 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC22.92■■□□□ 1.26
Msh6P54276 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC22.92■■□□□ 1.26
Msh6P54276 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Msh6P54276 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC22.92■■□□□ 1.26
Msh6P54276 Gm18032-201ENSMUST00000222541 538 ntBASIC22.92■■□□□ 1.26
Msh6P54276 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Msh6P54276 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Msh6P54276 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Msh6P54276 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Msh6P54276 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Msh6P54276 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Msh6P54276 Gm10654-201ENSMUST00000098653 1633 ntBASIC22.92■■□□□ 1.26
Msh6P54276 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Msh6P54276 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Msh6P54276 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC22.92■■□□□ 1.26
Msh6P54276 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Msh6P54276 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
Msh6P54276 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Msh6P54276 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Msh6P54276 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC22.91■■□□□ 1.26
Msh6P54276 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC22.91■■□□□ 1.26
Msh6P54276 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Msh6P54276 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Msh6P54276 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Msh6P54276 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Msh6P54276 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Msh6P54276 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Msh6P54276 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Msh6P54276 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Msh6P54276 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Msh6P54276 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Msh6P54276 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Msh6P54276 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
Msh6P54276 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Msh6P54276 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Msh6P54276 Gm38342-201ENSMUST00000195710 2980 ntBASIC22.9■■□□□ 1.26
Msh6P54276 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Msh6P54276 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Msh6P54276 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC22.9■■□□□ 1.26
Msh6P54276 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Msh6P54276 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC22.9■■□□□ 1.26
Msh6P54276 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC22.89■■□□□ 1.26
Msh6P54276 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Msh6P54276 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Msh6P54276 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Msh6P54276 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Msh6P54276 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Msh6P54276 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC22.89■■□□□ 1.25
Msh6P54276 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Msh6P54276 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Msh6P54276 Gm23634-201ENSMUST00000175071 91 ntBASIC22.89■■□□□ 1.25
Msh6P54276 Gm6728-201ENSMUST00000178117 1065 ntBASIC22.89■■□□□ 1.25
Msh6P54276 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Msh6P54276 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Msh6P54276 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
Msh6P54276 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Msh6P54276 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Msh6P54276 Gm18959-201ENSMUST00000208954 655 ntBASIC22.88■■□□□ 1.25
Msh6P54276 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
Msh6P54276 AC159205.6-201ENSMUST00000224935 887 ntBASIC22.88■■□□□ 1.25
Msh6P54276 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms