Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atxn1P54254 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Atxn1P54254 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atxn1P54254 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atxn1P54254 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.83■□□□□ 0.44
Atxn1P54254 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.83■□□□□ 0.44
Atxn1P54254 Odf3b-204ENSMUST00000227834 930 ntBASIC17.83■□□□□ 0.44
Atxn1P54254 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Atxn1P54254 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Atxn1P54254 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atxn1P54254 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atxn1P54254 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Atxn1P54254 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn1P54254 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn1P54254 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.82■□□□□ 0.44
Atxn1P54254 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn1P54254 Gm14859-201ENSMUST00000117752 357 ntBASIC17.82■□□□□ 0.44
Atxn1P54254 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn1P54254 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.82■□□□□ 0.44
Atxn1P54254 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.82■□□□□ 0.44
Atxn1P54254 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn1P54254 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn1P54254 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn1P54254 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn1P54254 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn1P54254 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn1P54254 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn1P54254 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn1P54254 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.81■□□□□ 0.44
Atxn1P54254 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn1P54254 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn1P54254 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn1P54254 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn1P54254 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.81■□□□□ 0.44
Atxn1P54254 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.81■□□□□ 0.44
Atxn1P54254 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn1P54254 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Atxn1P54254 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn1P54254 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn1P54254 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn1P54254 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn1P54254 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn1P54254 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn1P54254 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn1P54254 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn1P54254 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Atxn1P54254 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atxn1P54254 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atxn1P54254 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.8■□□□□ 0.44
Atxn1P54254 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atxn1P54254 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.8■□□□□ 0.44
Atxn1P54254 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Atxn1P54254 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atxn1P54254 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atxn1P54254 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atxn1P54254 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Atxn1P54254 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atxn1P54254 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.8■□□□□ 0.44
Atxn1P54254 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atxn1P54254 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Atxn1P54254 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atxn1P54254 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atxn1P54254 Gm3375-201ENSMUST00000203929 796 ntBASIC17.8■□□□□ 0.44
Atxn1P54254 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.8■□□□□ 0.44
Atxn1P54254 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atxn1P54254 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atxn1P54254 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atxn1P54254 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atxn1P54254 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atxn1P54254 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Atxn1P54254 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Atxn1P54254 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atxn1P54254 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atxn1P54254 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atxn1P54254 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.79■□□□□ 0.44
Atxn1P54254 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atxn1P54254 Gm18959-201ENSMUST00000208954 655 ntBASIC17.79■□□□□ 0.44
Atxn1P54254 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atxn1P54254 Gm7461-201ENSMUST00000058918 827 ntBASIC17.79■□□□□ 0.44
Atxn1P54254 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Atxn1P54254 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atxn1P54254 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.79■□□□□ 0.44
Atxn1P54254 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Atxn1P54254 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atxn1P54254 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.79■□□□□ 0.44
Atxn1P54254 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atxn1P54254 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.78■□□□□ 0.44
Atxn1P54254 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Atxn1P54254 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.78■□□□□ 0.44
Atxn1P54254 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Atxn1P54254 Timm23-208ENSMUST00000226683 750 ntBASIC17.78■□□□□ 0.44
Atxn1P54254 Mtag2-201ENSMUST00000058665 714 ntBASIC17.78■□□□□ 0.44
Atxn1P54254 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Atxn1P54254 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atxn1P54254 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atxn1P54254 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atxn1P54254 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atxn1P54254 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atxn1P54254 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atxn1P54254 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms