Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox1P53783 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sox1P53783 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.42■□□□□ 0.54
Sox1P53783 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Sox1P53783 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox1P53783 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Sox1P53783 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox1P53783 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox1P53783 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.41■□□□□ 0.54
Sox1P53783 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox1P53783 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox1P53783 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox1P53783 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox1P53783 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox1P53783 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox1P53783 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.41■□□□□ 0.54
Sox1P53783 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Sox1P53783 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.41■□□□□ 0.54
Sox1P53783 Mir1668-201ENSMUST00000184114 107 ntBASIC18.41■□□□□ 0.54
Sox1P53783 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sox1P53783 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.41■□□□□ 0.54
Sox1P53783 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Sox1P53783 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox1P53783 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
Sox1P53783 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox1P53783 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sox1P53783 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.4■□□□□ 0.54
Sox1P53783 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Sox1P53783 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sox1P53783 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Sox1P53783 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Sox1P53783 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox1P53783 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Sox1P53783 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.39■□□□□ 0.54
Sox1P53783 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Sox1P53783 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox1P53783 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sox1P53783 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.39■□□□□ 0.53
Sox1P53783 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sox1P53783 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox1P53783 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.39■□□□□ 0.53
Sox1P53783 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sox1P53783 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sox1P53783 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox1P53783 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox1P53783 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox1P53783 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sox1P53783 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Sox1P53783 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox1P53783 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox1P53783 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox1P53783 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sox1P53783 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox1P53783 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox1P53783 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Sox1P53783 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox1P53783 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox1P53783 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.38■□□□□ 0.53
Sox1P53783 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.38■□□□□ 0.53
Sox1P53783 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox1P53783 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox1P53783 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox1P53783 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sox1P53783 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.38■□□□□ 0.53
Sox1P53783 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sox1P53783 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox1P53783 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox1P53783 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox1P53783 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox1P53783 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.37■□□□□ 0.53
Sox1P53783 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox1P53783 Gm11452-201ENSMUST00000122376 690 ntBASIC18.37■□□□□ 0.53
Sox1P53783 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.37■□□□□ 0.53
Sox1P53783 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.37■□□□□ 0.53
Sox1P53783 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox1P53783 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox1P53783 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox1P53783 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sox1P53783 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox1P53783 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sox1P53783 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox1P53783 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox1P53783 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox1P53783 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox1P53783 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sox1P53783 Gm11355-201ENSMUST00000121120 306 ntBASIC18.36■□□□□ 0.53
Sox1P53783 Gm11594-201ENSMUST00000122313 162 ntBASIC18.36■□□□□ 0.53
Sox1P53783 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.36■□□□□ 0.53
Sox1P53783 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sox1P53783 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox1P53783 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.36■□□□□ 0.53
Sox1P53783 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sox1P53783 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox1P53783 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox1P53783 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox1P53783 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox1P53783 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sox1P53783 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Sox1P53783 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Sox1P53783 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms