Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.81■□□□□ 0.44
Pdx1P52946 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdx1P52946 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.81■□□□□ 0.44
Pdx1P52946 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.81■□□□□ 0.44
Pdx1P52946 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdx1P52946 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.81■□□□□ 0.44
Pdx1P52946 Zfp783-201ENSMUST00000095946 670 ntBASIC17.81■□□□□ 0.44
Pdx1P52946 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pdx1P52946 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdx1P52946 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdx1P52946 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.81■□□□□ 0.44
Pdx1P52946 Flg-201ENSMUST00000050758 1488 ntBASIC17.81■□□□□ 0.44
Pdx1P52946 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdx1P52946 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdx1P52946 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pdx1P52946 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdx1P52946 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdx1P52946 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
Pdx1P52946 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdx1P52946 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdx1P52946 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdx1P52946 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.8■□□□□ 0.44
Pdx1P52946 Gm11927-201ENSMUST00000118472 759 ntBASIC17.8■□□□□ 0.44
Pdx1P52946 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdx1P52946 Gm27275-201ENSMUST00000184318 272 ntBASIC17.8■□□□□ 0.44
Pdx1P52946 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.8■□□□□ 0.44
Pdx1P52946 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.8■□□□□ 0.44
Pdx1P52946 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdx1P52946 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdx1P52946 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdx1P52946 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pdx1P52946 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdx1P52946 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pdx1P52946 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdx1P52946 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdx1P52946 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdx1P52946 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
Pdx1P52946 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.79■□□□□ 0.44
Pdx1P52946 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdx1P52946 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pdx1P52946 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.79■□□□□ 0.44
Pdx1P52946 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.79■□□□□ 0.44
Pdx1P52946 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pdx1P52946 Gm38285-201ENSMUST00000192928 922 ntBASIC17.79■□□□□ 0.44
Pdx1P52946 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdx1P52946 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdx1P52946 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Pdx1P52946 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdx1P52946 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdx1P52946 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdx1P52946 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.79■□□□□ 0.44
Pdx1P52946 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdx1P52946 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdx1P52946 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdx1P52946 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdx1P52946 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pdx1P52946 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdx1P52946 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdx1P52946 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pdx1P52946 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pdx1P52946 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pdx1P52946 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdx1P52946 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdx1P52946 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.78■□□□□ 0.44
Pdx1P52946 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pdx1P52946 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdx1P52946 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdx1P52946 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdx1P52946 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdx1P52946 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdx1P52946 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdx1P52946 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.77■□□□□ 0.44
Pdx1P52946 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pdx1P52946 Mtag2-201ENSMUST00000058665 714 ntBASIC17.77■□□□□ 0.44
Pdx1P52946 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pdx1P52946 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pdx1P52946 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdx1P52946 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pdx1P52946 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdx1P52946 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.77■□□□□ 0.44
Pdx1P52946 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pdx1P52946 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pdx1P52946 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pdx1P52946 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Pdx1P52946 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pdx1P52946 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pdx1P52946 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Pdx1P52946 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pdx1P52946 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdx1P52946 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdx1P52946 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdx1P52946 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdx1P52946 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pdx1P52946 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdx1P52946 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pdx1P52946 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pdx1P52946 Gm11249-201ENSMUST00000117071 859 ntBASIC17.76■□□□□ 0.43
Pdx1P52946 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pdx1P52946 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pdx1P52946 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms