Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Xcl1P47993 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Xcl1P47993 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Xcl1P47993 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Xcl1P47993 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.83□□□□□ -0.52
Xcl1P47993 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Xcl1P47993 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xcl1P47993 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xcl1P47993 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.82□□□□□ -0.52
Xcl1P47993 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xcl1P47993 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Xcl1P47993 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xcl1P47993 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xcl1P47993 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Xcl1P47993 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xcl1P47993 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xcl1P47993 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC11.82□□□□□ -0.52
Xcl1P47993 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC11.82□□□□□ -0.52
Xcl1P47993 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Xcl1P47993 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Xcl1P47993 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Xcl1P47993 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Xcl1P47993 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xcl1P47993 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Xcl1P47993 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Xcl1P47993 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xcl1P47993 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Xcl1P47993 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.81□□□□□ -0.52
Xcl1P47993 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC11.81□□□□□ -0.52
Xcl1P47993 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC11.81□□□□□ -0.52
Xcl1P47993 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Xcl1P47993 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Xcl1P47993 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 Gm10571-201ENSMUST00000097869 1638 ntBASIC11.81□□□□□ -0.52
Xcl1P47993 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Xcl1P47993 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 AA386476-201ENSMUST00000098781 1665 ntBASIC11.81□□□□□ -0.52
Xcl1P47993 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Xcl1P47993 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xcl1P47993 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xcl1P47993 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Xcl1P47993 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xcl1P47993 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Xcl1P47993 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.8□□□□□ -0.52
Xcl1P47993 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Xcl1P47993 Gm45774-201ENSMUST00000211992 2665 ntBASIC11.8□□□□□ -0.52
Xcl1P47993 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xcl1P47993 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xcl1P47993 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xcl1P47993 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Xcl1P47993 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Xcl1P47993 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Xcl1P47993 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.8□□□□□ -0.52
Xcl1P47993 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Xcl1P47993 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xcl1P47993 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xcl1P47993 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Xcl1P47993 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Xcl1P47993 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms