Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gli1P47806 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gli1P47806 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.55■□□□□ 0.4
Gli1P47806 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gli1P47806 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gli1P47806 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gli1P47806 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gli1P47806 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Gli1P47806 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.55■□□□□ 0.4
Gli1P47806 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.55■□□□□ 0.4
Gli1P47806 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Gli1P47806 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gli1P47806 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gli1P47806 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gli1P47806 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gli1P47806 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Gli1P47806 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gli1P47806 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gli1P47806 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Gli1P47806 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gli1P47806 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gli1P47806 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gli1P47806 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gli1P47806 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Gli1P47806 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Gli1P47806 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Gli1P47806 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gli1P47806 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gli1P47806 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Gli1P47806 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Gli1P47806 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.54■□□□□ 0.4
Gli1P47806 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.54■□□□□ 0.4
Gli1P47806 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gli1P47806 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gli1P47806 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gli1P47806 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Gli1P47806 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gli1P47806 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gli1P47806 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gli1P47806 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gli1P47806 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gli1P47806 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gli1P47806 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gli1P47806 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gli1P47806 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.53■□□□□ 0.4
Gli1P47806 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gli1P47806 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gli1P47806 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gli1P47806 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gli1P47806 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gli1P47806 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gli1P47806 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gli1P47806 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gli1P47806 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gli1P47806 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gli1P47806 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Gli1P47806 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Gli1P47806 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.53■□□□□ 0.4
Gli1P47806 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gli1P47806 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gli1P47806 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gli1P47806 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gli1P47806 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.52■□□□□ 0.4
Gli1P47806 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gli1P47806 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.52■□□□□ 0.4
Gli1P47806 Gm22240-201ENSMUST00000175225 82 ntBASIC17.52■□□□□ 0.4
Gli1P47806 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gli1P47806 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Gli1P47806 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
Gli1P47806 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gli1P47806 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gli1P47806 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gli1P47806 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gli1P47806 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gli1P47806 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Gli1P47806 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.51■□□□□ 0.39
Gli1P47806 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.51■□□□□ 0.39
Gli1P47806 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.51■□□□□ 0.39
Gli1P47806 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Gli1P47806 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gli1P47806 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gli1P47806 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gli1P47806 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli1P47806 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli1P47806 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gli1P47806 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli1P47806 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli1P47806 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Gli1P47806 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.5■□□□□ 0.39
Gli1P47806 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli1P47806 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.5■□□□□ 0.39
Gli1P47806 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli1P47806 Gm4968-201ENSMUST00000071458 858 ntBASIC17.5■□□□□ 0.39
Gli1P47806 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Gli1P47806 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli1P47806 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli1P47806 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli1P47806 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.5■□□□□ 0.39
Gli1P47806 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gli1P47806 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms