Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Gm5408-201ENSMUST00000197998 747 ntBASIC17.33■□□□□ 0.36
Rph3aP47708 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rph3aP47708 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rph3aP47708 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Rph3aP47708 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.33■□□□□ 0.36
Rph3aP47708 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rph3aP47708 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rph3aP47708 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Rph3aP47708 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rph3aP47708 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rph3aP47708 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rph3aP47708 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rph3aP47708 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.32■□□□□ 0.36
Rph3aP47708 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rph3aP47708 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rph3aP47708 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rph3aP47708 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.32■□□□□ 0.36
Rph3aP47708 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.32■□□□□ 0.36
Rph3aP47708 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rph3aP47708 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rph3aP47708 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rph3aP47708 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rph3aP47708 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rph3aP47708 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rph3aP47708 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rph3aP47708 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rph3aP47708 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rph3aP47708 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rph3aP47708 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rph3aP47708 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rph3aP47708 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rph3aP47708 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rph3aP47708 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rph3aP47708 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rph3aP47708 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.31■□□□□ 0.36
Rph3aP47708 Gm44549-201ENSMUST00000208351 577 ntBASIC17.31■□□□□ 0.36
Rph3aP47708 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.31■□□□□ 0.36
Rph3aP47708 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rph3aP47708 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rph3aP47708 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rph3aP47708 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rph3aP47708 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.31■□□□□ 0.36
Rph3aP47708 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rph3aP47708 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rph3aP47708 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rph3aP47708 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rph3aP47708 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rph3aP47708 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rph3aP47708 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rph3aP47708 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.31■□□□□ 0.36
Rph3aP47708 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rph3aP47708 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rph3aP47708 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rph3aP47708 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rph3aP47708 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rph3aP47708 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rph3aP47708 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rph3aP47708 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rph3aP47708 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.3■□□□□ 0.36
Rph3aP47708 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rph3aP47708 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.3■□□□□ 0.36
Rph3aP47708 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.3■□□□□ 0.36
Rph3aP47708 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rph3aP47708 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rph3aP47708 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rph3aP47708 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rph3aP47708 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rph3aP47708 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.3■□□□□ 0.36
Rph3aP47708 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rph3aP47708 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Rph3aP47708 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rph3aP47708 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rph3aP47708 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.29■□□□□ 0.36
Rph3aP47708 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.29■□□□□ 0.36
Rph3aP47708 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rph3aP47708 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Rph3aP47708 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rph3aP47708 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.29■□□□□ 0.36
Rph3aP47708 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rph3aP47708 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rph3aP47708 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rph3aP47708 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.29■□□□□ 0.36
Rph3aP47708 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rph3aP47708 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.28■□□□□ 0.36
Rph3aP47708 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.28■□□□□ 0.36
Rph3aP47708 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rph3aP47708 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rph3aP47708 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.28■□□□□ 0.36
Rph3aP47708 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rph3aP47708 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rph3aP47708 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rph3aP47708 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rph3aP47708 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rph3aP47708 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rph3aP47708 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Rph3aP47708 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.27■□□□□ 0.36
Rph3aP47708 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.27■□□□□ 0.36
Rph3aP47708 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rph3aP47708 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rph3aP47708 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms