Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Gdf6P43028 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gdf6P43028 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gdf6P43028 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gdf6P43028 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gdf6P43028 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gdf6P43028 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gdf6P43028 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gdf6P43028 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Gdf6P43028 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Gdf6P43028 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.95■□□□□ 0.62
Gdf6P43028 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.95■□□□□ 0.62
Gdf6P43028 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gdf6P43028 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gdf6P43028 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gdf6P43028 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gdf6P43028 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.94■□□□□ 0.62
Gdf6P43028 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gdf6P43028 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.94■□□□□ 0.62
Gdf6P43028 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gdf6P43028 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gdf6P43028 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gdf6P43028 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Gdf6P43028 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Gdf6P43028 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gdf6P43028 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gdf6P43028 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gdf6P43028 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Gdf6P43028 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gdf6P43028 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.93■□□□□ 0.62
Gdf6P43028 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.93■□□□□ 0.62
Gdf6P43028 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gdf6P43028 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gdf6P43028 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.93■□□□□ 0.62
Gdf6P43028 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gdf6P43028 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gdf6P43028 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gdf6P43028 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Gdf6P43028 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.93■□□□□ 0.62
Gdf6P43028 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gdf6P43028 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Gdf6P43028 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gdf6P43028 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gdf6P43028 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gdf6P43028 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gdf6P43028 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.92■□□□□ 0.62
Gdf6P43028 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gdf6P43028 Gm21814-202ENSMUST00000203277 873 ntBASIC18.92■□□□□ 0.62
Gdf6P43028 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.92■□□□□ 0.62
Gdf6P43028 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.92■□□□□ 0.62
Gdf6P43028 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Gdf6P43028 Tgds-204ENSMUST00000228543 1594 ntBASIC18.92■□□□□ 0.62
Gdf6P43028 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gdf6P43028 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gdf6P43028 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.92■□□□□ 0.62
Gdf6P43028 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gdf6P43028 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Gdf6P43028 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.91■□□□□ 0.62
Gdf6P43028 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gdf6P43028 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.91■□□□□ 0.62
Gdf6P43028 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gdf6P43028 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gdf6P43028 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.91■□□□□ 0.62
Gdf6P43028 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gdf6P43028 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gdf6P43028 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gdf6P43028 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Gdf6P43028 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.9■□□□□ 0.62
Gdf6P43028 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Gdf6P43028 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gdf6P43028 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.9■□□□□ 0.62
Gdf6P43028 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gdf6P43028 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.9■□□□□ 0.62
Gdf6P43028 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gdf6P43028 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Gdf6P43028 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Gdf6P43028 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gdf6P43028 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gdf6P43028 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Gdf6P43028 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gdf6P43028 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gdf6P43028 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gdf6P43028 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gdf6P43028 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gdf6P43028 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.89■□□□□ 0.61
Gdf6P43028 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.89■□□□□ 0.61
Gdf6P43028 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gdf6P43028 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gdf6P43028 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gdf6P43028 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gdf6P43028 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.89■□□□□ 0.61
Gdf6P43028 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gdf6P43028 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gdf6P43028 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gdf6P43028 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gdf6P43028 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gdf6P43028 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gdf6P43028 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gdf6P43028 Iqck-206ENSMUST00000208658 2891 ntBASIC18.88■□□□□ 0.61
Gdf6P43028 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms