Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rom1P32958 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rom1P32958 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.28□□□□□ -0.12
Rom1P32958 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.28□□□□□ -0.12
Rom1P32958 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rom1P32958 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.28□□□□□ -0.12
Rom1P32958 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.28□□□□□ -0.12
Rom1P32958 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.28□□□□□ -0.12
Rom1P32958 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.28□□□□□ -0.12
Rom1P32958 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Rom1P32958 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rom1P32958 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.28□□□□□ -0.12
Rom1P32958 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rom1P32958 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rom1P32958 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rom1P32958 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rom1P32958 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rom1P32958 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rom1P32958 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Rom1P32958 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rom1P32958 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rom1P32958 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rom1P32958 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rom1P32958 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.27□□□□□ -0.13
Rom1P32958 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rom1P32958 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Rom1P32958 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rom1P32958 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.27□□□□□ -0.13
Rom1P32958 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.27□□□□□ -0.13
Rom1P32958 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rom1P32958 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rom1P32958 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.26□□□□□ -0.13
Rom1P32958 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rom1P32958 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rom1P32958 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rom1P32958 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rom1P32958 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rom1P32958 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rom1P32958 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rom1P32958 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.26□□□□□ -0.13
Rom1P32958 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Rom1P32958 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rom1P32958 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rom1P32958 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rom1P32958 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rom1P32958 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rom1P32958 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rom1P32958 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rom1P32958 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rom1P32958 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rom1P32958 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rom1P32958 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rom1P32958 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rom1P32958 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rom1P32958 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Rom1P32958 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rom1P32958 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rom1P32958 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rom1P32958 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rom1P32958 Gm12922-201ENSMUST00000120626 809 ntBASIC14.25□□□□□ -0.13
Rom1P32958 Gm11421-201ENSMUST00000122124 294 ntBASIC14.25□□□□□ -0.13
Rom1P32958 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.25□□□□□ -0.13
Rom1P32958 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.25□□□□□ -0.13
Rom1P32958 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rom1P32958 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.25□□□□□ -0.13
Rom1P32958 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rom1P32958 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Rom1P32958 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rom1P32958 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rom1P32958 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rom1P32958 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rom1P32958 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rom1P32958 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rom1P32958 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rom1P32958 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rom1P32958 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rom1P32958 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rom1P32958 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rom1P32958 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rom1P32958 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rom1P32958 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms