Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl6P27784 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl6P27784 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.04□□□□□ -0.16
Ccl6P27784 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccl6P27784 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.04□□□□□ -0.16
Ccl6P27784 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl6P27784 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl6P27784 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl6P27784 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl6P27784 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl6P27784 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl6P27784 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl6P27784 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccl6P27784 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl6P27784 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl6P27784 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.03□□□□□ -0.16
Ccl6P27784 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.03□□□□□ -0.16
Ccl6P27784 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl6P27784 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl6P27784 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.03□□□□□ -0.16
Ccl6P27784 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl6P27784 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccl6P27784 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl6P27784 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl6P27784 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.03□□□□□ -0.16
Ccl6P27784 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccl6P27784 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ccl6P27784 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl6P27784 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl6P27784 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl6P27784 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccl6P27784 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl6P27784 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccl6P27784 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl6P27784 Gm7291-201ENSMUST00000199147 382 ntBASIC14.02□□□□□ -0.17
Ccl6P27784 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl6P27784 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccl6P27784 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl6P27784 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl6P27784 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl6P27784 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl6P27784 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ccl6P27784 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccl6P27784 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.02□□□□□ -0.17
Ccl6P27784 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl6P27784 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl6P27784 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl6P27784 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl6P27784 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl6P27784 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl6P27784 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccl6P27784 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl6P27784 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl6P27784 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl6P27784 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccl6P27784 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl6P27784 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl6P27784 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl6P27784 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl6P27784 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccl6P27784 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl6P27784 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccl6P27784 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl6P27784 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccl6P27784 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccl6P27784 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl6P27784 Gm42555-201ENSMUST00000199304 1039 ntBASIC14□□□□□ -0.17
Ccl6P27784 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl6P27784 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl6P27784 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl6P27784 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl6P27784 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl6P27784 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14□□□□□ -0.17
Ccl6P27784 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl6P27784 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl6P27784 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccl6P27784 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl6P27784 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl6P27784 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ccl6P27784 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Ccl6P27784 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.99□□□□□ -0.17
Ccl6P27784 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccl6P27784 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccl6P27784 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl6P27784 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms