Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm42545-201ENSMUST00000202755 922 ntBASIC15.04■□□□□ -0
Col8a2P25318 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.04■□□□□ -0
Col8a2P25318 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.04■□□□□ -0
Col8a2P25318 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Col8a2P25318 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col8a2P25318 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col8a2P25318 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col8a2P25318 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.04■□□□□ -0
Col8a2P25318 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
Col8a2P25318 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col8a2P25318 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col8a2P25318 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col8a2P25318 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col8a2P25318 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col8a2P25318 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.03■□□□□ -0
Col8a2P25318 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.03■□□□□ -0
Col8a2P25318 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Col8a2P25318 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col8a2P25318 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col8a2P25318 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col8a2P25318 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col8a2P25318 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col8a2P25318 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col8a2P25318 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col8a2P25318 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Col8a2P25318 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col8a2P25318 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col8a2P25318 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.02■□□□□ -0
Col8a2P25318 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.02■□□□□ -0
Col8a2P25318 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.02■□□□□ -0
Col8a2P25318 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col8a2P25318 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Col8a2P25318 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col8a2P25318 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col8a2P25318 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.02□□□□□ -0.01
Col8a2P25318 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Col8a2P25318 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.02□□□□□ -0.01
Col8a2P25318 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col8a2P25318 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col8a2P25318 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col8a2P25318 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.02□□□□□ -0.01
Col8a2P25318 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col8a2P25318 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col8a2P25318 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col8a2P25318 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.01□□□□□ -0.01
Col8a2P25318 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col8a2P25318 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Col8a2P25318 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Col8a2P25318 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
Col8a2P25318 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col8a2P25318 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col8a2P25318 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col8a2P25318 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col8a2P25318 Gm18666-201ENSMUST00000190039 958 ntBASIC15.01□□□□□ -0.01
Col8a2P25318 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col8a2P25318 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Col8a2P25318 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col8a2P25318 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col8a2P25318 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col8a2P25318 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col8a2P25318 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col8a2P25318 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col8a2P25318 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col8a2P25318 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col8a2P25318 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col8a2P25318 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col8a2P25318 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col8a2P25318 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col8a2P25318 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15□□□□□ -0.01
Col8a2P25318 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Col8a2P25318 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col8a2P25318 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col8a2P25318 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col8a2P25318 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col8a2P25318 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col8a2P25318 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Col8a2P25318 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.99□□□□□ -0.01
Col8a2P25318 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.99□□□□□ -0.01
Col8a2P25318 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col8a2P25318 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col8a2P25318 Mir6982-201ENSMUST00000184354 68 ntBASIC14.99□□□□□ -0.01
Col8a2P25318 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col8a2P25318 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.99□□□□□ -0.01
Col8a2P25318 Gm43183-201ENSMUST00000200632 547 ntBASIC14.99□□□□□ -0.01
Col8a2P25318 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.99□□□□□ -0.01
Col8a2P25318 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col8a2P25318 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col8a2P25318 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col8a2P25318 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col8a2P25318 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Col8a2P25318 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Col8a2P25318 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col8a2P25318 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col8a2P25318 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col8a2P25318 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.98□□□□□ -0.01
Col8a2P25318 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.98□□□□□ -0.01
Col8a2P25318 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col8a2P25318 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col8a2P25318 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.98□□□□□ -0.01
Col8a2P25318 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms