Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Aldh1a1P24549 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Aldh1a1P24549 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Aldh1a1P24549 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Aldh1a1P24549 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Aldh1a1P24549 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Aldh1a1P24549 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.34■□□□□ 0.69
Aldh1a1P24549 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.34■□□□□ 0.69
Aldh1a1P24549 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Aldh1a1P24549 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Aldh1a1P24549 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Aldh1a1P24549 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Aldh1a1P24549 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Aldh1a1P24549 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Aldh1a1P24549 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Aldh1a1P24549 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Aldh1a1P24549 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Aldh1a1P24549 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Aldh1a1P24549 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Aldh1a1P24549 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Aldh1a1P24549 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Aldh1a1P24549 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Aldh1a1P24549 Gm13474-201ENSMUST00000122466 815 ntBASIC19.33■□□□□ 0.68
Aldh1a1P24549 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Aldh1a1P24549 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Aldh1a1P24549 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.33■□□□□ 0.68
Aldh1a1P24549 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Aldh1a1P24549 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.33■□□□□ 0.68
Aldh1a1P24549 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Aldh1a1P24549 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.32■□□□□ 0.68
Aldh1a1P24549 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Aldh1a1P24549 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Aldh1a1P24549 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Aldh1a1P24549 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Aldh1a1P24549 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.32■□□□□ 0.68
Aldh1a1P24549 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Aldh1a1P24549 Gm17661-201ENSMUST00000170317 270 ntBASIC19.32■□□□□ 0.68
Aldh1a1P24549 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Aldh1a1P24549 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Aldh1a1P24549 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Aldh1a1P24549 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Aldh1a1P24549 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Aldh1a1P24549 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Aldh1a1P24549 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Aldh1a1P24549 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Aldh1a1P24549 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Aldh1a1P24549 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Aldh1a1P24549 Gm7284-201ENSMUST00000131667 944 ntBASIC19.31■□□□□ 0.68
Aldh1a1P24549 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Aldh1a1P24549 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.31■□□□□ 0.68
Aldh1a1P24549 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Aldh1a1P24549 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Aldh1a1P24549 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Aldh1a1P24549 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Aldh1a1P24549 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Aldh1a1P24549 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Aldh1a1P24549 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Aldh1a1P24549 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Aldh1a1P24549 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Aldh1a1P24549 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Aldh1a1P24549 Golph3-202ENSMUST00000226517 2359 ntBASIC19.3■□□□□ 0.68
Aldh1a1P24549 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Aldh1a1P24549 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Aldh1a1P24549 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Aldh1a1P24549 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Aldh1a1P24549 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Aldh1a1P24549 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Aldh1a1P24549 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.3■□□□□ 0.68
Aldh1a1P24549 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Aldh1a1P24549 Gm4974-201ENSMUST00000209974 875 ntBASIC19.3■□□□□ 0.68
Aldh1a1P24549 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Aldh1a1P24549 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.3■□□□□ 0.68
Aldh1a1P24549 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Aldh1a1P24549 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Aldh1a1P24549 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Aldh1a1P24549 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Aldh1a1P24549 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Aldh1a1P24549 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Aldh1a1P24549 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Aldh1a1P24549 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Aldh1a1P24549 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Aldh1a1P24549 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Aldh1a1P24549 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Aldh1a1P24549 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.29■□□□□ 0.68
Aldh1a1P24549 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Aldh1a1P24549 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Aldh1a1P24549 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Aldh1a1P24549 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Aldh1a1P24549 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Aldh1a1P24549 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Aldh1a1P24549 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Aldh1a1P24549 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Aldh1a1P24549 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Aldh1a1P24549 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Aldh1a1P24549 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Aldh1a1P24549 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Aldh1a1P24549 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Aldh1a1P24549 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Aldh1a1P24549 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.28■□□□□ 0.68
Aldh1a1P24549 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms