Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxd8P23463 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxd8P23463 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxd8P23463 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.66■□□□□ 0.58
Hoxd8P23463 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxd8P23463 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxd8P23463 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.66■□□□□ 0.58
Hoxd8P23463 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.66■□□□□ 0.58
Hoxd8P23463 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxd8P23463 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxd8P23463 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxd8P23463 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxd8P23463 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hoxd8P23463 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.66■□□□□ 0.58
Hoxd8P23463 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Hoxd8P23463 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Hoxd8P23463 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.65■□□□□ 0.58
Hoxd8P23463 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.65■□□□□ 0.58
Hoxd8P23463 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxd8P23463 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxd8P23463 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxd8P23463 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.65■□□□□ 0.58
Hoxd8P23463 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxd8P23463 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxd8P23463 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Hoxd8P23463 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.65■□□□□ 0.58
Hoxd8P23463 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxd8P23463 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxd8P23463 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxd8P23463 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hoxd8P23463 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hoxd8P23463 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Hoxd8P23463 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxd8P23463 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxd8P23463 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxd8P23463 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxd8P23463 Gm6659-201ENSMUST00000174752 547 ntBASIC18.64■□□□□ 0.57
Hoxd8P23463 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.64■□□□□ 0.57
Hoxd8P23463 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.64■□□□□ 0.57
Hoxd8P23463 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxd8P23463 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.64■□□□□ 0.57
Hoxd8P23463 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxd8P23463 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxd8P23463 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxd8P23463 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxd8P23463 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hoxd8P23463 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxd8P23463 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.63■□□□□ 0.57
Hoxd8P23463 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Hoxd8P23463 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxd8P23463 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.63■□□□□ 0.57
Hoxd8P23463 Gm13401-201ENSMUST00000117074 291 ntBASIC18.63■□□□□ 0.57
Hoxd8P23463 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxd8P23463 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxd8P23463 Gm45058-201ENSMUST00000205810 766 ntBASIC18.63■□□□□ 0.57
Hoxd8P23463 Gm18959-201ENSMUST00000208954 655 ntBASIC18.63■□□□□ 0.57
Hoxd8P23463 Gm18101-201ENSMUST00000215769 548 ntBASIC18.63■□□□□ 0.57
Hoxd8P23463 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxd8P23463 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxd8P23463 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxd8P23463 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxd8P23463 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxd8P23463 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxd8P23463 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hoxd8P23463 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxd8P23463 Gm27741-201ENSMUST00000185060 237 ntBASIC18.62■□□□□ 0.57
Hoxd8P23463 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxd8P23463 Gm18032-201ENSMUST00000222541 538 ntBASIC18.62■□□□□ 0.57
Hoxd8P23463 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Hoxd8P23463 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Hoxd8P23463 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Hoxd8P23463 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxd8P23463 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.62■□□□□ 0.57
Hoxd8P23463 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Hoxd8P23463 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hoxd8P23463 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxd8P23463 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxd8P23463 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxd8P23463 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.61■□□□□ 0.57
Hoxd8P23463 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxd8P23463 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxd8P23463 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxd8P23463 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Hoxd8P23463 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.61■□□□□ 0.57
Hoxd8P23463 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hoxd8P23463 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxd8P23463 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.6■□□□□ 0.57
Hoxd8P23463 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Hoxd8P23463 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Hoxd8P23463 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxd8P23463 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxd8P23463 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.6■□□□□ 0.57
Hoxd8P23463 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxd8P23463 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxd8P23463 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Hoxd8P23463 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hoxd8P23463 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Hoxd8P23463 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Hoxd8P23463 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hoxd8P23463 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms