Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hmga1P17095 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hmga1P17095 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmga1P17095 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmga1P17095 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hmga1P17095 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmga1P17095 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmga1P17095 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmga1P17095 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmga1P17095 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmga1P17095 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmga1P17095 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmga1P17095 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.45■□□□□ 0.54
Hmga1P17095 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.45■□□□□ 0.54
Hmga1P17095 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.45■□□□□ 0.54
Hmga1P17095 Odf3b-204ENSMUST00000227834 930 ntBASIC18.45■□□□□ 0.54
Hmga1P17095 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmga1P17095 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Hmga1P17095 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hmga1P17095 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hmga1P17095 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmga1P17095 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.45■□□□□ 0.54
Hmga1P17095 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmga1P17095 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
Hmga1P17095 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmga1P17095 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmga1P17095 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmga1P17095 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Hmga1P17095 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Hmga1P17095 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.44■□□□□ 0.54
Hmga1P17095 Gm11643-201ENSMUST00000119578 864 ntBASIC18.44■□□□□ 0.54
Hmga1P17095 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Hmga1P17095 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.44■□□□□ 0.54
Hmga1P17095 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.44■□□□□ 0.54
Hmga1P17095 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.44■□□□□ 0.54
Hmga1P17095 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.44■□□□□ 0.54
Hmga1P17095 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmga1P17095 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmga1P17095 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Hmga1P17095 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.44■□□□□ 0.54
Hmga1P17095 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmga1P17095 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Hmga1P17095 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmga1P17095 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.43■□□□□ 0.54
Hmga1P17095 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.43■□□□□ 0.54
Hmga1P17095 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Hmga1P17095 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmga1P17095 Gm3375-201ENSMUST00000203929 796 ntBASIC18.43■□□□□ 0.54
Hmga1P17095 Timm23-208ENSMUST00000226683 750 ntBASIC18.43■□□□□ 0.54
Hmga1P17095 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.43■□□□□ 0.54
Hmga1P17095 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmga1P17095 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Hmga1P17095 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmga1P17095 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmga1P17095 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Hmga1P17095 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hmga1P17095 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmga1P17095 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmga1P17095 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Hmga1P17095 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmga1P17095 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hmga1P17095 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.42■□□□□ 0.54
Hmga1P17095 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmga1P17095 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hmga1P17095 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmga1P17095 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmga1P17095 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmga1P17095 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.42■□□□□ 0.54
Hmga1P17095 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmga1P17095 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmga1P17095 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmga1P17095 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmga1P17095 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmga1P17095 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmga1P17095 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Hmga1P17095 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Hmga1P17095 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmga1P17095 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmga1P17095 Gm43799-201ENSMUST00000201845 579 ntBASIC18.41■□□□□ 0.54
Hmga1P17095 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.41■□□□□ 0.54
Hmga1P17095 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmga1P17095 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.41■□□□□ 0.54
Hmga1P17095 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmga1P17095 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmga1P17095 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmga1P17095 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmga1P17095 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmga1P17095 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmga1P17095 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmga1P17095 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Hmga1P17095 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hmga1P17095 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmga1P17095 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hmga1P17095 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmga1P17095 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Hmga1P17095 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Hmga1P17095 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Hmga1P17095 Gm13836-201ENSMUST00000121159 501 ntBASIC18.4■□□□□ 0.54
Hmga1P17095 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hmga1P17095 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms