Protein–RNA interactions for Protein: P13516

Scd1, Acyl-CoA desaturase 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scd1P13516 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scd1P13516 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Scd1P13516 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scd1P13516 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scd1P13516 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scd1P13516 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scd1P13516 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scd1P13516 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scd1P13516 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scd1P13516 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.84■□□□□ 0.45
Scd1P13516 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.84■□□□□ 0.45
Scd1P13516 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scd1P13516 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scd1P13516 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Scd1P13516 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scd1P13516 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scd1P13516 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scd1P13516 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scd1P13516 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scd1P13516 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scd1P13516 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.83■□□□□ 0.45
Scd1P13516 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Scd1P13516 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scd1P13516 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scd1P13516 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scd1P13516 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scd1P13516 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scd1P13516 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scd1P13516 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scd1P13516 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scd1P13516 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scd1P13516 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scd1P13516 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scd1P13516 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scd1P13516 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scd1P13516 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scd1P13516 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scd1P13516 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scd1P13516 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.82■□□□□ 0.44
Scd1P13516 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.82■□□□□ 0.44
Scd1P13516 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scd1P13516 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scd1P13516 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Scd1P13516 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scd1P13516 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scd1P13516 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scd1P13516 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.82■□□□□ 0.44
Scd1P13516 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scd1P13516 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scd1P13516 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Scd1P13516 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Scd1P13516 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.81■□□□□ 0.44
Scd1P13516 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.81■□□□□ 0.44
Scd1P13516 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scd1P13516 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scd1P13516 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Scd1P13516 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scd1P13516 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.81■□□□□ 0.44
Scd1P13516 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scd1P13516 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Scd1P13516 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scd1P13516 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scd1P13516 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scd1P13516 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.81■□□□□ 0.44
Scd1P13516 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scd1P13516 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scd1P13516 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.8■□□□□ 0.44
Scd1P13516 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scd1P13516 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scd1P13516 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
Scd1P13516 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scd1P13516 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.8■□□□□ 0.44
Scd1P13516 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scd1P13516 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.8■□□□□ 0.44
Scd1P13516 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.8■□□□□ 0.44
Scd1P13516 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scd1P13516 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scd1P13516 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scd1P13516 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scd1P13516 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scd1P13516 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scd1P13516 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Scd1P13516 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Scd1P13516 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scd1P13516 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.79■□□□□ 0.44
Scd1P13516 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scd1P13516 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.79■□□□□ 0.44
Scd1P13516 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scd1P13516 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scd1P13516 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.79■□□□□ 0.44
Scd1P13516 Gm13234-201ENSMUST00000120010 747 ntBASIC17.79■□□□□ 0.44
Scd1P13516 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scd1P13516 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scd1P13516 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scd1P13516 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scd1P13516 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scd1P13516 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scd1P13516 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scd1P13516 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scd1P13516 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms