Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rb1P13405 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rb1P13405 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rb1P13405 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rb1P13405 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rb1P13405 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.31■□□□□ 0.52
Rb1P13405 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rb1P13405 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rb1P13405 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rb1P13405 Gm15378-201ENSMUST00000121894 207 ntBASIC18.31■□□□□ 0.52
Rb1P13405 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.31■□□□□ 0.52
Rb1P13405 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rb1P13405 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.31■□□□□ 0.52
Rb1P13405 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Rb1P13405 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.31■□□□□ 0.52
Rb1P13405 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rb1P13405 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rb1P13405 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rb1P13405 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rb1P13405 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rb1P13405 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rb1P13405 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rb1P13405 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rb1P13405 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rb1P13405 Gm11249-201ENSMUST00000117071 859 ntBASIC18.3■□□□□ 0.52
Rb1P13405 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rb1P13405 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.3■□□□□ 0.52
Rb1P13405 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rb1P13405 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rb1P13405 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rb1P13405 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rb1P13405 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.3■□□□□ 0.52
Rb1P13405 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rb1P13405 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rb1P13405 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.29■□□□□ 0.52
Rb1P13405 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rb1P13405 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Rb1P13405 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rb1P13405 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.29■□□□□ 0.52
Rb1P13405 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rb1P13405 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rb1P13405 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Rb1P13405 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rb1P13405 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rb1P13405 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rb1P13405 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rb1P13405 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rb1P13405 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rb1P13405 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rb1P13405 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rb1P13405 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.29■□□□□ 0.52
Rb1P13405 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rb1P13405 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rb1P13405 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rb1P13405 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rb1P13405 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rb1P13405 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rb1P13405 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rb1P13405 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rb1P13405 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rb1P13405 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rb1P13405 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rb1P13405 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rb1P13405 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rb1P13405 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rb1P13405 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rb1P13405 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.28■□□□□ 0.52
Rb1P13405 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rb1P13405 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.28■□□□□ 0.52
Rb1P13405 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.28■□□□□ 0.52
Rb1P13405 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rb1P13405 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.27■□□□□ 0.52
Rb1P13405 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rb1P13405 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rb1P13405 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rb1P13405 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Rb1P13405 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.27■□□□□ 0.52
Rb1P13405 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.27■□□□□ 0.52
Rb1P13405 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rb1P13405 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rb1P13405 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Rb1P13405 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rb1P13405 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rb1P13405 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rb1P13405 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Rb1P13405 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rb1P13405 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rb1P13405 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rb1P13405 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rb1P13405 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rb1P13405 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rb1P13405 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rb1P13405 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rb1P13405 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.26■□□□□ 0.51
Rb1P13405 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rb1P13405 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.26■□□□□ 0.51
Rb1P13405 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rb1P13405 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rb1P13405 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rb1P13405 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms