Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.01□□□□□ -0.01
Ly6c1P0CW02 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Ly6c1P0CW02 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ly6c1P0CW02 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ly6c1P0CW02 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ly6c1P0CW02 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ly6c1P0CW02 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ly6c1P0CW02 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ly6c1P0CW02 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ly6c1P0CW02 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ly6c1P0CW02 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ly6c1P0CW02 Fam105a-203ENSMUST00000226170 3043 ntBASIC15□□□□□ -0.01
Ly6c1P0CW02 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ly6c1P0CW02 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15□□□□□ -0.01
Ly6c1P0CW02 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ly6c1P0CW02 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ly6c1P0CW02 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
Ly6c1P0CW02 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15□□□□□ -0.01
Ly6c1P0CW02 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ly6c1P0CW02 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ly6c1P0CW02 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15□□□□□ -0.01
Ly6c1P0CW02 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ly6c1P0CW02 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ly6c1P0CW02 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ly6c1P0CW02 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ly6c1P0CW02 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Ly6c1P0CW02 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Ly6c1P0CW02 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Ly6c1P0CW02 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ly6c1P0CW02 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ly6c1P0CW02 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Ly6c1P0CW02 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ly6c1P0CW02 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ly6c1P0CW02 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.99□□□□□ -0.01
Ly6c1P0CW02 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.99□□□□□ -0.01
Ly6c1P0CW02 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.99□□□□□ -0.01
Ly6c1P0CW02 Gm10698-201ENSMUST00000182663 604 ntBASIC14.99□□□□□ -0.01
Ly6c1P0CW02 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ly6c1P0CW02 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ly6c1P0CW02 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ly6c1P0CW02 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ly6c1P0CW02 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.99□□□□□ -0.01
Ly6c1P0CW02 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ly6c1P0CW02 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ly6c1P0CW02 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ly6c1P0CW02 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.98□□□□□ -0.01
Ly6c1P0CW02 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ly6c1P0CW02 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ly6c1P0CW02 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ly6c1P0CW02 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.98□□□□□ -0.01
Ly6c1P0CW02 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ly6c1P0CW02 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.98□□□□□ -0.01
Ly6c1P0CW02 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ly6c1P0CW02 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.98□□□□□ -0.01
Ly6c1P0CW02 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.98□□□□□ -0.01
Ly6c1P0CW02 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.98□□□□□ -0.01
Ly6c1P0CW02 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ly6c1P0CW02 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ly6c1P0CW02 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ly6c1P0CW02 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ly6c1P0CW02 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ly6c1P0CW02 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ly6c1P0CW02 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ly6c1P0CW02 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ly6c1P0CW02 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.97□□□□□ -0.01
Ly6c1P0CW02 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ly6c1P0CW02 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ly6c1P0CW02 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ly6c1P0CW02 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.97□□□□□ -0.01
Ly6c1P0CW02 Gm10138-203ENSMUST00000206952 366 ntBASIC14.97□□□□□ -0.01
Ly6c1P0CW02 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.97□□□□□ -0.01
Ly6c1P0CW02 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ly6c1P0CW02 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ly6c1P0CW02 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ly6c1P0CW02 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.97□□□□□ -0.01
Ly6c1P0CW02 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ly6c1P0CW02 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ly6c1P0CW02 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ly6c1P0CW02 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.96□□□□□ -0.01
Ly6c1P0CW02 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ly6c1P0CW02 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.96□□□□□ -0.01
Ly6c1P0CW02 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ly6c1P0CW02 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.96□□□□□ -0.01
Ly6c1P0CW02 Gm15375-201ENSMUST00000119510 849 ntBASIC14.96□□□□□ -0.01
Ly6c1P0CW02 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ly6c1P0CW02 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ly6c1P0CW02 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ly6c1P0CW02 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ly6c1P0CW02 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ly6c1P0CW02 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ly6c1P0CW02 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ly6c1P0CW02 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ly6c1P0CW02 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ly6c1P0CW02 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ly6c1P0CW02 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ly6c1P0CW02 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ly6c1P0CW02 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ly6c1P0CW02 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ly6c1P0CW02 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ly6c1P0CW02 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms