Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smim1P0C8K7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smim1P0C8K7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smim1P0C8K7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smim1P0C8K7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smim1P0C8K7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.43□□□□□ -0.42
Smim1P0C8K7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Gm13216-201ENSMUST00000117145 591 ntBASIC12.43□□□□□ -0.42
Smim1P0C8K7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim1P0C8K7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.42□□□□□ -0.42
Smim1P0C8K7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Gm27502-201ENSMUST00000183495 199 ntBASIC12.42□□□□□ -0.42
Smim1P0C8K7 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.42□□□□□ -0.42
Smim1P0C8K7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim1P0C8K7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim1P0C8K7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim1P0C8K7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim1P0C8K7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim1P0C8K7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim1P0C8K7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim1P0C8K7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim1P0C8K7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim1P0C8K7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC12.41□□□□□ -0.42
Smim1P0C8K7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Smim1P0C8K7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim1P0C8K7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim1P0C8K7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim1P0C8K7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim1P0C8K7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC12.41□□□□□ -0.42
Smim1P0C8K7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim1P0C8K7 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.41□□□□□ -0.42
Smim1P0C8K7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim1P0C8K7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim1P0C8K7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim1P0C8K7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Smim1P0C8K7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim1P0C8K7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim1P0C8K7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim1P0C8K7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Smim1P0C8K7 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.4□□□□□ -0.42
Smim1P0C8K7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim1P0C8K7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smim1P0C8K7 Gm7332-201ENSMUST00000118351 454 ntBASIC12.4□□□□□ -0.42
Smim1P0C8K7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Smim1P0C8K7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smim1P0C8K7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Smim1P0C8K7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim1P0C8K7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Smim1P0C8K7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Smim1P0C8K7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim1P0C8K7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim1P0C8K7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim1P0C8K7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim1P0C8K7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim1P0C8K7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Smim1P0C8K7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smim1P0C8K7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smim1P0C8K7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smim1P0C8K7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smim1P0C8K7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smim1P0C8K7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smim1P0C8K7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smim1P0C8K7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms