Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxc8P09025 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxc8P09025 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hoxc8P09025 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxc8P09025 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxc8P09025 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxc8P09025 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxc8P09025 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Hoxc8P09025 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.28■□□□□ 0.68
Hoxc8P09025 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxc8P09025 Gm2274-201ENSMUST00000184539 609 ntBASIC19.28■□□□□ 0.68
Hoxc8P09025 Gm21362-201ENSMUST00000194272 928 ntBASIC19.28■□□□□ 0.68
Hoxc8P09025 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxc8P09025 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxc8P09025 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxc8P09025 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Hoxc8P09025 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxc8P09025 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxc8P09025 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxc8P09025 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxc8P09025 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxc8P09025 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxc8P09025 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxc8P09025 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.27■□□□□ 0.68
Hoxc8P09025 Gm24841-201ENSMUST00000158676 357 ntBASIC19.27■□□□□ 0.68
Hoxc8P09025 Mir5130-201ENSMUST00000175160 84 ntBASIC19.27■□□□□ 0.68
Hoxc8P09025 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.27■□□□□ 0.68
Hoxc8P09025 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.27■□□□□ 0.68
Hoxc8P09025 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
Hoxc8P09025 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxc8P09025 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxc8P09025 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Hoxc8P09025 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hoxc8P09025 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Hoxc8P09025 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Hoxc8P09025 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc8P09025 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.26■□□□□ 0.67
Hoxc8P09025 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc8P09025 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc8P09025 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc8P09025 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.26■□□□□ 0.67
Hoxc8P09025 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.26■□□□□ 0.67
Hoxc8P09025 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc8P09025 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc8P09025 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc8P09025 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Hoxc8P09025 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc8P09025 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.26■□□□□ 0.67
Hoxc8P09025 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc8P09025 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hoxc8P09025 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc8P09025 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc8P09025 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.25■□□□□ 0.67
Hoxc8P09025 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Hoxc8P09025 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc8P09025 Gm6345-202ENSMUST00000180900 204 ntBASIC19.25■□□□□ 0.67
Hoxc8P09025 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.25■□□□□ 0.67
Hoxc8P09025 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc8P09025 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc8P09025 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc8P09025 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc8P09025 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc8P09025 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.25■□□□□ 0.67
Hoxc8P09025 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc8P09025 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hoxc8P09025 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc8P09025 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc8P09025 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Hoxc8P09025 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.24■□□□□ 0.67
Hoxc8P09025 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.24■□□□□ 0.67
Hoxc8P09025 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Hoxc8P09025 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.24■□□□□ 0.67
Hoxc8P09025 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.24■□□□□ 0.67
Hoxc8P09025 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.24■□□□□ 0.67
Hoxc8P09025 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.24■□□□□ 0.67
Hoxc8P09025 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc8P09025 Gm10819-201ENSMUST00000099988 561 ntBASIC19.24■□□□□ 0.67
Hoxc8P09025 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc8P09025 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxc8P09025 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.24■□□□□ 0.67
Hoxc8P09025 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc8P09025 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc8P09025 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Hoxc8P09025 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc8P09025 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc8P09025 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc8P09025 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Hoxc8P09025 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc8P09025 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc8P09025 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc8P09025 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc8P09025 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc8P09025 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.23■□□□□ 0.67
Hoxc8P09025 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc8P09025 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Hoxc8P09025 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc8P09025 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Hoxc8P09025 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc8P09025 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc8P09025 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms