Protein–RNA interactions for Protein: P08046

Egr1, Early growth response protein 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Egr1P08046 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Egr1P08046 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Egr1P08046 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Egr1P08046 Gm18733-201ENSMUST00000173950 856 ntBASIC16.7■□□□□ 0.26
Egr1P08046 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Egr1P08046 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Egr1P08046 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Egr1P08046 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Egr1P08046 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Egr1P08046 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Egr1P08046 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Egr1P08046 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Egr1P08046 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.69■□□□□ 0.26
Egr1P08046 Gm7638-201ENSMUST00000121348 967 ntBASIC16.69■□□□□ 0.26
Egr1P08046 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.69■□□□□ 0.26
Egr1P08046 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Egr1P08046 Gm6623-201ENSMUST00000173570 544 ntBASIC16.69■□□□□ 0.26
Egr1P08046 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.69■□□□□ 0.26
Egr1P08046 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Egr1P08046 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.69■□□□□ 0.26
Egr1P08046 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Egr1P08046 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Egr1P08046 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Egr1P08046 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Egr1P08046 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Egr1P08046 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.68■□□□□ 0.26
Egr1P08046 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Egr1P08046 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.68■□□□□ 0.26
Egr1P08046 Gm27459-201ENSMUST00000184860 107 ntBASIC16.68■□□□□ 0.26
Egr1P08046 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.68■□□□□ 0.26
Egr1P08046 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Egr1P08046 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Egr1P08046 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Egr1P08046 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Egr1P08046 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.67■□□□□ 0.26
Egr1P08046 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
Egr1P08046 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Egr1P08046 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.67■□□□□ 0.26
Egr1P08046 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Egr1P08046 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.67■□□□□ 0.26
Egr1P08046 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Egr1P08046 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Egr1P08046 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Egr1P08046 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Egr1P08046 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.67■□□□□ 0.26
Egr1P08046 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Egr1P08046 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Egr1P08046 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Egr1P08046 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Egr1P08046 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Egr1P08046 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Egr1P08046 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Egr1P08046 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Egr1P08046 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Egr1P08046 Gm43347-201ENSMUST00000200226 580 ntBASIC16.66■□□□□ 0.26
Egr1P08046 Gm4974-201ENSMUST00000209974 875 ntBASIC16.66■□□□□ 0.26
Egr1P08046 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Egr1P08046 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Egr1P08046 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Egr1P08046 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.66■□□□□ 0.26
Egr1P08046 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Egr1P08046 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Egr1P08046 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Egr1P08046 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Egr1P08046 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Egr1P08046 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Egr1P08046 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Egr1P08046 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Egr1P08046 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.65■□□□□ 0.26
Egr1P08046 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Egr1P08046 Gm7063-201ENSMUST00000186840 981 ntBASIC16.65■□□□□ 0.26
Egr1P08046 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Egr1P08046 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Egr1P08046 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Egr1P08046 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Egr1P08046 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Egr1P08046 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Egr1P08046 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Egr1P08046 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Egr1P08046 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Egr1P08046 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.64■□□□□ 0.25
Egr1P08046 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Egr1P08046 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Egr1P08046 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Egr1P08046 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.64■□□□□ 0.25
Egr1P08046 Gm11594-201ENSMUST00000122313 162 ntBASIC16.64■□□□□ 0.25
Egr1P08046 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.64■□□□□ 0.25
Egr1P08046 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Egr1P08046 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Egr1P08046 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Egr1P08046 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Egr1P08046 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Egr1P08046 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Egr1P08046 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Egr1P08046 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.63■□□□□ 0.25
Egr1P08046 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.63■□□□□ 0.25
Egr1P08046 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Egr1P08046 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Egr1P08046 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Egr1P08046 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms