Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
P06328 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06328 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P06328 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06328 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06328 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06328 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06328 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06328 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P06328 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06328 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06328 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06328 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P06328 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.18□□□□□ -0.3
P06328 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
P06328 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06328 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
P06328 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P06328 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06328 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.18□□□□□ -0.3
P06328 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.18□□□□□ -0.3
P06328 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.18□□□□□ -0.3
P06328 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P06328 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06328 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06328 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06328 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06328 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P06328 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06328 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.17□□□□□ -0.3
P06328 Gm42778-201ENSMUST00000199644 553 ntBASIC13.17□□□□□ -0.3
P06328 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06328 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06328 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06328 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.17□□□□□ -0.3
P06328 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P06328 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P06328 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06328 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P06328 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06328 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06328 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06328 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
P06328 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06328 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06328 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06328 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
P06328 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.16□□□□□ -0.3
P06328 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
P06328 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P06328 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06328 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06328 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.16□□□□□ -0.3
P06328 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P06328 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
P06328 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06328 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06328 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06328 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
P06328 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
P06328 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
P06328 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P06328 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.16□□□□□ -0.3
P06328 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06328 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06328 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06328 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06328 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06328 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06328 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.16□□□□□ -0.3
P06328 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.16□□□□□ -0.3
P06328 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
P06328 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06328 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06328 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06328 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.15□□□□□ -0.3
P06328 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P06328 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
P06328 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P06328 Gm22325-201ENSMUST00000158904 308 ntBASIC13.15□□□□□ -0.3
P06328 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06328 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
P06328 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06328 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06328 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06328 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
P06328 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.15□□□□□ -0.3
P06328 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06328 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P06328 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06328 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06328 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
P06328 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06328 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P06328 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.15□□□□□ -0.3
P06328 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06328 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06328 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P06328 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P06328 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms