Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Col4a1P02463 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Col4a1P02463 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Col4a1P02463 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Col4a1P02463 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col4a1P02463 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Col4a1P02463 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col4a1P02463 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col4a1P02463 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Col4a1P02463 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Col4a1P02463 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Col4a1P02463 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC22.3■■□□□ 1.16
Col4a1P02463 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Col4a1P02463 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col4a1P02463 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col4a1P02463 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Col4a1P02463 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col4a1P02463 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col4a1P02463 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Col4a1P02463 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Col4a1P02463 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Col4a1P02463 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col4a1P02463 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col4a1P02463 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col4a1P02463 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col4a1P02463 Gm10013-201ENSMUST00000106074 672 ntBASIC22.28■■□□□ 1.16
Col4a1P02463 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col4a1P02463 Gm4974-201ENSMUST00000209974 875 ntBASIC22.28■■□□□ 1.16
Col4a1P02463 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
Col4a1P02463 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col4a1P02463 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col4a1P02463 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col4a1P02463 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col4a1P02463 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col4a1P02463 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col4a1P02463 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col4a1P02463 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Col4a1P02463 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col4a1P02463 Gm7370-201ENSMUST00000219471 767 ntBASIC22.27■■□□□ 1.16
Col4a1P02463 AC154471.1-201ENSMUST00000224418 436 ntBASIC22.27■■□□□ 1.16
Col4a1P02463 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Col4a1P02463 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
Col4a1P02463 Gm38342-201ENSMUST00000195710 2980 ntBASIC22.27■■□□□ 1.16
Col4a1P02463 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Col4a1P02463 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC22.26■■□□□ 1.15
Col4a1P02463 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col4a1P02463 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Col4a1P02463 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col4a1P02463 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Col4a1P02463 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col4a1P02463 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Col4a1P02463 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col4a1P02463 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC22.26■■□□□ 1.15
Col4a1P02463 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col4a1P02463 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Col4a1P02463 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col4a1P02463 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC22.26■■□□□ 1.15
Col4a1P02463 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Col4a1P02463 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Col4a1P02463 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Col4a1P02463 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC22.26■■□□□ 1.15
Col4a1P02463 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col4a1P02463 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col4a1P02463 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Col4a1P02463 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col4a1P02463 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col4a1P02463 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC22.25■■□□□ 1.15
Col4a1P02463 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Col4a1P02463 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC22.24■■□□□ 1.15
Col4a1P02463 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col4a1P02463 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col4a1P02463 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC22.24■■□□□ 1.15
Col4a1P02463 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col4a1P02463 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col4a1P02463 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col4a1P02463 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Col4a1P02463 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col4a1P02463 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Col4a1P02463 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Col4a1P02463 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
Col4a1P02463 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC22.23■■□□□ 1.15
Col4a1P02463 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC22.23■■□□□ 1.15
Col4a1P02463 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col4a1P02463 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col4a1P02463 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col4a1P02463 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col4a1P02463 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col4a1P02463 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC22.23■■□□□ 1.15
Col4a1P02463 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Col4a1P02463 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Col4a1P02463 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC22.23■■□□□ 1.15
Col4a1P02463 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col4a1P02463 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Col4a1P02463 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Col4a1P02463 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col4a1P02463 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col4a1P02463 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Col4a1P02463 Gm6728-201ENSMUST00000178117 1065 ntBASIC22.22■■□□□ 1.15
Col4a1P02463 Gm7791-201ENSMUST00000219066 539 ntBASIC22.22■■□□□ 1.15
Col4a1P02463 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms