Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn3O88705 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.24■□□□□ 0.35
Hcn3O88705 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.24■□□□□ 0.35
Hcn3O88705 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn3O88705 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn3O88705 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn3O88705 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn3O88705 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn3O88705 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn3O88705 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn3O88705 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn3O88705 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.23■□□□□ 0.35
Hcn3O88705 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Hcn3O88705 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.23■□□□□ 0.35
Hcn3O88705 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.23■□□□□ 0.35
Hcn3O88705 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn3O88705 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn3O88705 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn3O88705 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn3O88705 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.23■□□□□ 0.35
Hcn3O88705 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.23■□□□□ 0.35
Hcn3O88705 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn3O88705 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn3O88705 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn3O88705 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Hcn3O88705 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Hcn3O88705 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn3O88705 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn3O88705 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn3O88705 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Hcn3O88705 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hcn3O88705 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn3O88705 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Hcn3O88705 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn3O88705 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn3O88705 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hcn3O88705 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hcn3O88705 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hcn3O88705 Haglr-201ENSMUST00000100000 2085 ntBASIC17.21■□□□□ 0.35
Hcn3O88705 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hcn3O88705 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hcn3O88705 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hcn3O88705 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hcn3O88705 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Hcn3O88705 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hcn3O88705 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.21■□□□□ 0.35
Hcn3O88705 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hcn3O88705 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Hcn3O88705 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.2■□□□□ 0.34
Hcn3O88705 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn3O88705 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn3O88705 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn3O88705 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn3O88705 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.2■□□□□ 0.34
Hcn3O88705 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn3O88705 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn3O88705 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn3O88705 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn3O88705 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn3O88705 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn3O88705 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn3O88705 Tgds-204ENSMUST00000228543 1594 ntBASIC17.19■□□□□ 0.34
Hcn3O88705 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn3O88705 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn3O88705 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn3O88705 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn3O88705 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn3O88705 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn3O88705 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn3O88705 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hcn3O88705 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hcn3O88705 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn3O88705 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hcn3O88705 Gm43060-201ENSMUST00000200621 289 ntBASIC17.19■□□□□ 0.34
Hcn3O88705 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn3O88705 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn3O88705 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn3O88705 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hcn3O88705 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.19■□□□□ 0.34
Hcn3O88705 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn3O88705 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.19■□□□□ 0.34
Hcn3O88705 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn3O88705 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn3O88705 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn3O88705 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn3O88705 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn3O88705 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
Hcn3O88705 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcn3O88705 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcn3O88705 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hcn3O88705 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcn3O88705 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hcn3O88705 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.18■□□□□ 0.34
Hcn3O88705 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Hcn3O88705 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hcn3O88705 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hcn3O88705 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hcn3O88705 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcn3O88705 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.18■□□□□ 0.34
Hcn3O88705 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms