Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC23.53■■□□□ 1.36
Ubr1O70481 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Ubr1O70481 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ubr1O70481 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ubr1O70481 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ubr1O70481 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ubr1O70481 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ubr1O70481 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ubr1O70481 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ubr1O70481 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ubr1O70481 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ubr1O70481 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
Ubr1O70481 Gm29791-202ENSMUST00000207888 369 ntBASIC23.52■■□□□ 1.36
Ubr1O70481 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC23.52■■□□□ 1.36
Ubr1O70481 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Ubr1O70481 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Ubr1O70481 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Ubr1O70481 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Ubr1O70481 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ubr1O70481 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ubr1O70481 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Ubr1O70481 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ubr1O70481 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ubr1O70481 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.35
Ubr1O70481 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Ubr1O70481 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Ubr1O70481 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ubr1O70481 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ubr1O70481 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Ubr1O70481 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ubr1O70481 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Ubr1O70481 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ubr1O70481 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
Ubr1O70481 AA414768-201ENSMUST00000121924 1257 ntBASIC23.5■■□□□ 1.35
Ubr1O70481 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ubr1O70481 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ubr1O70481 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ubr1O70481 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC23.5■■□□□ 1.35
Ubr1O70481 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ubr1O70481 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ubr1O70481 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ubr1O70481 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Ubr1O70481 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ubr1O70481 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ubr1O70481 Gm21362-201ENSMUST00000194272 928 ntBASIC23.5■■□□□ 1.35
Ubr1O70481 Gm18101-201ENSMUST00000215769 548 ntBASIC23.5■■□□□ 1.35
Ubr1O70481 Gm7791-201ENSMUST00000219066 539 ntBASIC23.5■■□□□ 1.35
Ubr1O70481 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ubr1O70481 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ubr1O70481 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ubr1O70481 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ubr1O70481 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ubr1O70481 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ubr1O70481 Gm24841-201ENSMUST00000158676 357 ntBASIC23.49■■□□□ 1.35
Ubr1O70481 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC23.49■■□□□ 1.35
Ubr1O70481 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ubr1O70481 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ubr1O70481 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Ubr1O70481 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ubr1O70481 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC23.48■■□□□ 1.35
Ubr1O70481 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC23.48■■□□□ 1.35
Ubr1O70481 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ubr1O70481 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ubr1O70481 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ubr1O70481 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ubr1O70481 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ubr1O70481 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ubr1O70481 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ubr1O70481 Gm16061-201ENSMUST00000122167 857 ntBASIC23.47■■□□□ 1.35
Ubr1O70481 Gm6728-201ENSMUST00000178117 1065 ntBASIC23.47■■□□□ 1.35
Ubr1O70481 AC154471.1-201ENSMUST00000224418 436 ntBASIC23.47■■□□□ 1.35
Ubr1O70481 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ubr1O70481 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ubr1O70481 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ubr1O70481 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ubr1O70481 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Ubr1O70481 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Ubr1O70481 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Ubr1O70481 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr1O70481 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
Ubr1O70481 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr1O70481 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC23.46■■□□□ 1.35
Ubr1O70481 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr1O70481 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr1O70481 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr1O70481 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr1O70481 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr1O70481 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr1O70481 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr1O70481 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr1O70481 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr1O70481 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ubr1O70481 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Ubr1O70481 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
Ubr1O70481 Gm9731-201ENSMUST00000209480 747 ntBASIC23.45■■□□□ 1.34
Ubr1O70481 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ubr1O70481 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC23.45■■□□□ 1.34
Ubr1O70481 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ubr1O70481 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ubr1O70481 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms