Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf13O54965 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rnf13O54965 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf13O54965 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf13O54965 Tgds-204ENSMUST00000228543 1594 ntBASIC16.34■□□□□ 0.21
Rnf13O54965 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf13O54965 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf13O54965 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf13O54965 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf13O54965 Gm43060-201ENSMUST00000200621 289 ntBASIC16.34■□□□□ 0.21
Rnf13O54965 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf13O54965 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Rnf13O54965 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.34■□□□□ 0.21
Rnf13O54965 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rnf13O54965 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf13O54965 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf13O54965 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Rnf13O54965 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf13O54965 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf13O54965 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf13O54965 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf13O54965 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.33■□□□□ 0.21
Rnf13O54965 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf13O54965 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf13O54965 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf13O54965 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf13O54965 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf13O54965 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf13O54965 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf13O54965 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.33■□□□□ 0.2
Rnf13O54965 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf13O54965 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf13O54965 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf13O54965 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf13O54965 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf13O54965 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf13O54965 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf13O54965 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.32■□□□□ 0.2
Rnf13O54965 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf13O54965 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.32■□□□□ 0.2
Rnf13O54965 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf13O54965 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf13O54965 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf13O54965 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.32■□□□□ 0.2
Rnf13O54965 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf13O54965 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf13O54965 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf13O54965 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf13O54965 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rnf13O54965 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf13O54965 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf13O54965 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.31■□□□□ 0.2
Rnf13O54965 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf13O54965 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.31■□□□□ 0.2
Rnf13O54965 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf13O54965 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rnf13O54965 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf13O54965 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.31■□□□□ 0.2
Rnf13O54965 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf13O54965 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf13O54965 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf13O54965 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf13O54965 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf13O54965 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf13O54965 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf13O54965 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rnf13O54965 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf13O54965 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rnf13O54965 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf13O54965 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.3■□□□□ 0.2
Rnf13O54965 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rnf13O54965 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rnf13O54965 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf13O54965 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf13O54965 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf13O54965 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf13O54965 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf13O54965 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rnf13O54965 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf13O54965 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf13O54965 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf13O54965 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf13O54965 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf13O54965 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf13O54965 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rnf13O54965 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf13O54965 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf13O54965 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf13O54965 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf13O54965 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf13O54965 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.29■□□□□ 0.2
Rnf13O54965 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf13O54965 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf13O54965 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf13O54965 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf13O54965 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf13O54965 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf13O54965 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.28■□□□□ 0.2
Rnf13O54965 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rnf13O54965 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms