Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn5O54942 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn5O54942 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cldn5O54942 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn5O54942 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn5O54942 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn5O54942 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cldn5O54942 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Cldn5O54942 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn5O54942 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cldn5O54942 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn5O54942 Gm6576-201ENSMUST00000169678 883 ntBASIC18.69■□□□□ 0.58
Cldn5O54942 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.69■□□□□ 0.58
Cldn5O54942 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.69■□□□□ 0.58
Cldn5O54942 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cldn5O54942 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn5O54942 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cldn5O54942 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn5O54942 Mir1199-201ENSMUST00000117015 119 ntBASIC18.68■□□□□ 0.58
Cldn5O54942 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.68■□□□□ 0.58
Cldn5O54942 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn5O54942 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.68■□□□□ 0.58
Cldn5O54942 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cldn5O54942 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.68■□□□□ 0.58
Cldn5O54942 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn5O54942 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn5O54942 Fst-202ENSMUST00000223640 2612 ntBASIC18.68■□□□□ 0.58
Cldn5O54942 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cldn5O54942 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn5O54942 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn5O54942 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn5O54942 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.67■□□□□ 0.58
Cldn5O54942 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn5O54942 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.67■□□□□ 0.58
Cldn5O54942 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn5O54942 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Cldn5O54942 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn5O54942 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.67■□□□□ 0.58
Cldn5O54942 Gm37292-201ENSMUST00000192062 758 ntBASIC18.67■□□□□ 0.58
Cldn5O54942 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.67■□□□□ 0.58
Cldn5O54942 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn5O54942 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn5O54942 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn5O54942 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cldn5O54942 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cldn5O54942 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn5O54942 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn5O54942 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn5O54942 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn5O54942 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn5O54942 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.66■□□□□ 0.58
Cldn5O54942 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn5O54942 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn5O54942 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.66■□□□□ 0.58
Cldn5O54942 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.66■□□□□ 0.58
Cldn5O54942 Mir6982-201ENSMUST00000184354 68 ntBASIC18.66■□□□□ 0.58
Cldn5O54942 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn5O54942 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn5O54942 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cldn5O54942 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn5O54942 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn5O54942 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cldn5O54942 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn5O54942 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn5O54942 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn5O54942 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn5O54942 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cldn5O54942 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.65■□□□□ 0.58
Cldn5O54942 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cldn5O54942 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn5O54942 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn5O54942 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cldn5O54942 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.65■□□□□ 0.58
Cldn5O54942 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cldn5O54942 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.64■□□□□ 0.58
Cldn5O54942 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cldn5O54942 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cldn5O54942 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.64■□□□□ 0.57
Cldn5O54942 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn5O54942 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn5O54942 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn5O54942 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn5O54942 Gm715-201ENSMUST00000117865 831 ntBASIC18.64■□□□□ 0.57
Cldn5O54942 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.64■□□□□ 0.57
Cldn5O54942 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn5O54942 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn5O54942 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cldn5O54942 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn5O54942 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn5O54942 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn5O54942 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn5O54942 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn5O54942 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn5O54942 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.63■□□□□ 0.57
Cldn5O54942 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cldn5O54942 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
Cldn5O54942 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn5O54942 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn5O54942 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn5O54942 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms