Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.56■□□□□ 0.4
Npc1O35604 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1O35604 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1O35604 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.56■□□□□ 0.4
Npc1O35604 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1O35604 Gm18666-201ENSMUST00000190039 958 ntBASIC17.56■□□□□ 0.4
Npc1O35604 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Npc1O35604 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1O35604 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1O35604 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.56■□□□□ 0.4
Npc1O35604 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Npc1O35604 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Npc1O35604 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.55■□□□□ 0.4
Npc1O35604 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1O35604 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Npc1O35604 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Npc1O35604 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.55■□□□□ 0.4
Npc1O35604 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1O35604 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.55■□□□□ 0.4
Npc1O35604 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1O35604 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1O35604 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.55■□□□□ 0.4
Npc1O35604 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.55■□□□□ 0.4
Npc1O35604 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.55■□□□□ 0.4
Npc1O35604 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1O35604 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1O35604 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.55■□□□□ 0.4
Npc1O35604 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1O35604 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Npc1O35604 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1O35604 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1O35604 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Npc1O35604 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1O35604 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.54■□□□□ 0.4
Npc1O35604 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1O35604 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.54■□□□□ 0.4
Npc1O35604 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.54■□□□□ 0.4
Npc1O35604 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1O35604 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1O35604 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Npc1O35604 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1O35604 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1O35604 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.54■□□□□ 0.4
Npc1O35604 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Npc1O35604 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Npc1O35604 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Npc1O35604 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Npc1O35604 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1O35604 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1O35604 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.53■□□□□ 0.4
Npc1O35604 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1O35604 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1O35604 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1O35604 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.53■□□□□ 0.4
Npc1O35604 Gm27275-201ENSMUST00000184318 272 ntBASIC17.53■□□□□ 0.4
Npc1O35604 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1O35604 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.53■□□□□ 0.4
Npc1O35604 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.53■□□□□ 0.4
Npc1O35604 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Npc1O35604 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Npc1O35604 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Npc1O35604 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Npc1O35604 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Npc1O35604 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npc1O35604 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npc1O35604 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npc1O35604 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.52■□□□□ 0.4
Npc1O35604 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Npc1O35604 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.52■□□□□ 0.4
Npc1O35604 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.52■□□□□ 0.4
Npc1O35604 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npc1O35604 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Npc1O35604 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.52■□□□□ 0.4
Npc1O35604 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Npc1O35604 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Npc1O35604 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Npc1O35604 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.52■□□□□ 0.39
Npc1O35604 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Npc1O35604 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Npc1O35604 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.52■□□□□ 0.39
Npc1O35604 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1O35604 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1O35604 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1O35604 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1O35604 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1O35604 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.51■□□□□ 0.39
Npc1O35604 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.51■□□□□ 0.39
Npc1O35604 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1O35604 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Npc1O35604 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1O35604 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.51■□□□□ 0.39
Npc1O35604 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1O35604 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1O35604 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1O35604 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1O35604 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1O35604 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1O35604 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Npc1O35604 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.51■□□□□ 0.39
Npc1O35604 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms