Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abca4O35600 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.96■□□□□ 0.31
Abca4O35600 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abca4O35600 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abca4O35600 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.96■□□□□ 0.31
Abca4O35600 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.96■□□□□ 0.31
Abca4O35600 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.96■□□□□ 0.31
Abca4O35600 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abca4O35600 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abca4O35600 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abca4O35600 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Abca4O35600 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abca4O35600 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abca4O35600 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abca4O35600 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Abca4O35600 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Abca4O35600 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Abca4O35600 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.96■□□□□ 0.3
Abca4O35600 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Abca4O35600 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Abca4O35600 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Abca4O35600 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Abca4O35600 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abca4O35600 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.95■□□□□ 0.3
Abca4O35600 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Abca4O35600 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Abca4O35600 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Abca4O35600 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abca4O35600 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Abca4O35600 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.95■□□□□ 0.3
Abca4O35600 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Abca4O35600 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Abca4O35600 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.95■□□□□ 0.3
Abca4O35600 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.95■□□□□ 0.3
Abca4O35600 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.95■□□□□ 0.3
Abca4O35600 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.95■□□□□ 0.3
Abca4O35600 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abca4O35600 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Abca4O35600 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.95■□□□□ 0.3
Abca4O35600 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abca4O35600 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Abca4O35600 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Abca4O35600 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Abca4O35600 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Abca4O35600 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abca4O35600 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Abca4O35600 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Abca4O35600 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Abca4O35600 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Abca4O35600 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.93■□□□□ 0.3
Abca4O35600 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Abca4O35600 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abca4O35600 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.93■□□□□ 0.3
Abca4O35600 Rps4l-201ENSMUST00000071745 943 ntBASIC16.93■□□□□ 0.3
Abca4O35600 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abca4O35600 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abca4O35600 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abca4O35600 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.93■□□□□ 0.3
Abca4O35600 Gm1401-201ENSMUST00000122048 772 ntBASIC16.93■□□□□ 0.3
Abca4O35600 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.93■□□□□ 0.3
Abca4O35600 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Abca4O35600 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Abca4O35600 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abca4O35600 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Abca4O35600 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abca4O35600 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Abca4O35600 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.93■□□□□ 0.3
Abca4O35600 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abca4O35600 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abca4O35600 Gm23935-201ENSMUST00000102303 57 ntBASIC16.92■□□□□ 0.3
Abca4O35600 Gm24270-201ENSMUST00000102326 57 ntBASIC16.92■□□□□ 0.3
Abca4O35600 Gm24245-201ENSMUST00000157318 57 ntBASIC16.92■□□□□ 0.3
Abca4O35600 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Abca4O35600 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Abca4O35600 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.92■□□□□ 0.3
Abca4O35600 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abca4O35600 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Abca4O35600 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abca4O35600 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Abca4O35600 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Abca4O35600 Gm15794-201ENSMUST00000120182 631 ntBASIC16.92■□□□□ 0.3
Abca4O35600 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.92■□□□□ 0.3
Abca4O35600 Gm10576-201ENSMUST00000191927 825 ntBASIC16.92■□□□□ 0.3
Abca4O35600 Gm7213-201ENSMUST00000215977 950 ntBASIC16.92■□□□□ 0.3
Abca4O35600 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.92■□□□□ 0.3
Abca4O35600 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abca4O35600 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abca4O35600 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Abca4O35600 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Abca4O35600 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Abca4O35600 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Abca4O35600 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.91■□□□□ 0.3
Abca4O35600 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.91■□□□□ 0.3
Abca4O35600 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abca4O35600 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abca4O35600 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Abca4O35600 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.91■□□□□ 0.3
Abca4O35600 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Abca4O35600 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Abca4O35600 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms