Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clk2O35491 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk2O35491 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk2O35491 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk2O35491 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk2O35491 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Clk2O35491 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk2O35491 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Clk2O35491 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk2O35491 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Clk2O35491 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk2O35491 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Clk2O35491 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk2O35491 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clk2O35491 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk2O35491 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk2O35491 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clk2O35491 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk2O35491 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Clk2O35491 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk2O35491 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk2O35491 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clk2O35491 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clk2O35491 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clk2O35491 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.6■□□□□ 0.73
Clk2O35491 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk2O35491 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk2O35491 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Clk2O35491 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk2O35491 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk2O35491 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk2O35491 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Clk2O35491 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Clk2O35491 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.59■□□□□ 0.73
Clk2O35491 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.59■□□□□ 0.73
Clk2O35491 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk2O35491 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk2O35491 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.59■□□□□ 0.73
Clk2O35491 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clk2O35491 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
Clk2O35491 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clk2O35491 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clk2O35491 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clk2O35491 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.58■□□□□ 0.72
Clk2O35491 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clk2O35491 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clk2O35491 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clk2O35491 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clk2O35491 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clk2O35491 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clk2O35491 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Clk2O35491 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk2O35491 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk2O35491 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk2O35491 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Clk2O35491 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
Clk2O35491 Gm11643-201ENSMUST00000119578 864 ntBASIC19.57■□□□□ 0.72
Clk2O35491 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Clk2O35491 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.57■□□□□ 0.72
Clk2O35491 Gm21814-202ENSMUST00000203277 873 ntBASIC19.57■□□□□ 0.72
Clk2O35491 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk2O35491 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clk2O35491 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk2O35491 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk2O35491 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk2O35491 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.57■□□□□ 0.72
Clk2O35491 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clk2O35491 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Clk2O35491 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Clk2O35491 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.56■□□□□ 0.72
Clk2O35491 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Clk2O35491 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clk2O35491 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Clk2O35491 Mir7071-201ENSMUST00000184847 69 ntBASIC19.56■□□□□ 0.72
Clk2O35491 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.56■□□□□ 0.72
Clk2O35491 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.56■□□□□ 0.72
Clk2O35491 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clk2O35491 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clk2O35491 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.56■□□□□ 0.72
Clk2O35491 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clk2O35491 Iqck-206ENSMUST00000208658 2891 ntBASIC19.56■□□□□ 0.72
Clk2O35491 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.56■□□□□ 0.72
Clk2O35491 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clk2O35491 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clk2O35491 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clk2O35491 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clk2O35491 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Clk2O35491 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clk2O35491 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.55■□□□□ 0.72
Clk2O35491 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clk2O35491 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.55■□□□□ 0.72
Clk2O35491 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clk2O35491 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clk2O35491 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clk2O35491 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
Clk2O35491 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clk2O35491 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clk2O35491 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clk2O35491 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Clk2O35491 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms