Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf11aO35305 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf11aO35305 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf11aO35305 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf11aO35305 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf11aO35305 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf11aO35305 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Tnfrsf11aO35305 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf11aO35305 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf11aO35305 Gm37856-201ENSMUST00000191634 999 ntBASIC19.42■□□□□ 0.7
Tnfrsf11aO35305 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf11aO35305 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf11aO35305 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.42■□□□□ 0.7
Tnfrsf11aO35305 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf11aO35305 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf11aO35305 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Tnfrsf11aO35305 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf11aO35305 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf11aO35305 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf11aO35305 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf11aO35305 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf11aO35305 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.41■□□□□ 0.7
Tnfrsf11aO35305 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf11aO35305 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.41■□□□□ 0.7
Tnfrsf11aO35305 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf11aO35305 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Tnfrsf11aO35305 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
Tnfrsf11aO35305 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf11aO35305 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Tnfrsf11aO35305 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf11aO35305 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Tnfrsf11aO35305 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf11aO35305 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf11aO35305 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfrsf11aO35305 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfrsf11aO35305 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfrsf11aO35305 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.4■□□□□ 0.7
Tnfrsf11aO35305 Gm10653-202ENSMUST00000139570 835 ntBASIC19.4■□□□□ 0.7
Tnfrsf11aO35305 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfrsf11aO35305 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfrsf11aO35305 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfrsf11aO35305 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfrsf11aO35305 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf11aO35305 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.38■□□□□ 0.69
Tnfrsf11aO35305 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Tnfrsf11aO35305 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf11aO35305 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf11aO35305 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf11aO35305 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf11aO35305 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf11aO35305 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf11aO35305 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf11aO35305 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf11aO35305 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf11aO35305 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf11aO35305 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf11aO35305 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf11aO35305 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.37■□□□□ 0.69
Tnfrsf11aO35305 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf11aO35305 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf11aO35305 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf11aO35305 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Tnfrsf11aO35305 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf11aO35305 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf11aO35305 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf11aO35305 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Tnfrsf11aO35305 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf11aO35305 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf11aO35305 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf11aO35305 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf11aO35305 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Tnfrsf11aO35305 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Tnfrsf11aO35305 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf11aO35305 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.36■□□□□ 0.69
Tnfrsf11aO35305 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf11aO35305 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf11aO35305 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.36■□□□□ 0.69
Tnfrsf11aO35305 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf11aO35305 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf11aO35305 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfrsf11aO35305 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms