Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.3■□□□□ 0.52
Tnfrsf11bO08712 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Tnfrsf11bO08712 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11bO08712 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11bO08712 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf11bO08712 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf11bO08712 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Tnfrsf11bO08712 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.29■□□□□ 0.52
Tnfrsf11bO08712 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf11bO08712 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.29■□□□□ 0.52
Tnfrsf11bO08712 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Tnfrsf11bO08712 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Tnfrsf11bO08712 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.29■□□□□ 0.52
Tnfrsf11bO08712 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.29■□□□□ 0.52
Tnfrsf11bO08712 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.29■□□□□ 0.52
Tnfrsf11bO08712 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.29■□□□□ 0.52
Tnfrsf11bO08712 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf11bO08712 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf11bO08712 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.29■□□□□ 0.52
Tnfrsf11bO08712 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Tnfrsf11bO08712 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf11bO08712 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf11bO08712 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.28■□□□□ 0.52
Tnfrsf11bO08712 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf11bO08712 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.28■□□□□ 0.52
Tnfrsf11bO08712 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf11bO08712 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Tnfrsf11bO08712 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.28■□□□□ 0.52
Tnfrsf11bO08712 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf11bO08712 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.28■□□□□ 0.52
Tnfrsf11bO08712 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.28■□□□□ 0.52
Tnfrsf11bO08712 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf11bO08712 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf11bO08712 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfrsf11bO08712 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.28■□□□□ 0.52
Tnfrsf11bO08712 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Tnfrsf11bO08712 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf11bO08712 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.27■□□□□ 0.52
Tnfrsf11bO08712 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf11bO08712 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.27■□□□□ 0.52
Tnfrsf11bO08712 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.27■□□□□ 0.52
Tnfrsf11bO08712 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf11bO08712 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Tnfrsf11bO08712 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf11bO08712 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf11bO08712 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf11bO08712 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf11bO08712 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf11bO08712 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Tnfrsf11bO08712 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Tnfrsf11bO08712 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tnfrsf11bO08712 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Tnfrsf11bO08712 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11bO08712 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11bO08712 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11bO08712 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11bO08712 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11bO08712 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Tnfrsf11bO08712 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11bO08712 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11bO08712 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11bO08712 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11bO08712 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11bO08712 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11bO08712 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf11bO08712 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.26■□□□□ 0.51
Tnfrsf11bO08712 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11bO08712 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11bO08712 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11bO08712 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11bO08712 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11bO08712 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11bO08712 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.25■□□□□ 0.51
Tnfrsf11bO08712 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11bO08712 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11bO08712 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11bO08712 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11bO08712 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Tnfrsf11bO08712 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Tnfrsf11bO08712 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11bO08712 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.24■□□□□ 0.51
Tnfrsf11bO08712 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf11bO08712 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Tnfrsf11bO08712 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.24■□□□□ 0.51
Tnfrsf11bO08712 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf11bO08712 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf11bO08712 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf11bO08712 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Tnfrsf11bO08712 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.24■□□□□ 0.51
Tnfrsf11bO08712 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.24■□□□□ 0.51
Tnfrsf11bO08712 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf11bO08712 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf11bO08712 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf11bO08712 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf11bO08712 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf11bO08712 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11bO08712 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11bO08712 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf11bO08712 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11bO08712 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms