Protein–RNA interactions for Protein: O08529

Capn2, Calpain-2 catalytic subunit, mousemouse

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn2O08529 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Capn2O08529 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Capn2O08529 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Capn2O08529 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Capn2O08529 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Capn2O08529 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Capn2O08529 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Capn2O08529 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Capn2O08529 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Capn2O08529 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Capn2O08529 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Capn2O08529 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Capn2O08529 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Capn2O08529 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Capn2O08529 Gm6433-201ENSMUST00000118634 875 ntBASIC20.16■□□□□ 0.82
Capn2O08529 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Capn2O08529 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.16■□□□□ 0.82
Capn2O08529 Gm9987-201ENSMUST00000069768 567 ntBASIC20.16■□□□□ 0.82
Capn2O08529 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Capn2O08529 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Capn2O08529 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Capn2O08529 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Capn2O08529 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Capn2O08529 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Capn2O08529 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Capn2O08529 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.15■□□□□ 0.82
Capn2O08529 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Capn2O08529 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.15■□□□□ 0.82
Capn2O08529 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Capn2O08529 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Capn2O08529 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Capn2O08529 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Capn2O08529 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Capn2O08529 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Capn2O08529 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Capn2O08529 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.14■□□□□ 0.82
Capn2O08529 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Capn2O08529 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Capn2O08529 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Capn2O08529 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Capn2O08529 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.14■□□□□ 0.81
Capn2O08529 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Capn2O08529 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Capn2O08529 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Capn2O08529 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Capn2O08529 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Capn2O08529 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.14■□□□□ 0.81
Capn2O08529 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.14■□□□□ 0.81
Capn2O08529 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Capn2O08529 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Capn2O08529 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Capn2O08529 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.13■□□□□ 0.81
Capn2O08529 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Capn2O08529 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Capn2O08529 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Capn2O08529 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Capn2O08529 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Capn2O08529 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.13■□□□□ 0.81
Capn2O08529 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.13■□□□□ 0.81
Capn2O08529 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Capn2O08529 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Capn2O08529 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Capn2O08529 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Capn2O08529 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Capn2O08529 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Capn2O08529 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Capn2O08529 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Capn2O08529 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Capn2O08529 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.12■□□□□ 0.81
Capn2O08529 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Capn2O08529 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Capn2O08529 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.12■□□□□ 0.81
Capn2O08529 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Capn2O08529 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Capn2O08529 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Capn2O08529 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Capn2O08529 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Capn2O08529 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Capn2O08529 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Capn2O08529 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Capn2O08529 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Capn2O08529 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.11■□□□□ 0.81
Capn2O08529 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Capn2O08529 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Capn2O08529 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.11■□□□□ 0.81
Capn2O08529 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Capn2O08529 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Capn2O08529 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Capn2O08529 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Capn2O08529 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Capn2O08529 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.11■□□□□ 0.81
Capn2O08529 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Capn2O08529 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Capn2O08529 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Capn2O08529 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Capn2O08529 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Capn2O08529 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Capn2O08529 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Capn2O08529 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Capn2O08529 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms