Protein–RNA interactions for Protein: J3QMY9

Top6bl, Type 2 DNA topoisomerase 6 subunit B-like, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top6blJ3QMY9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.85■□□□□ 0.61
Top6blJ3QMY9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Top6blJ3QMY9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Top6blJ3QMY9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.85■□□□□ 0.61
Top6blJ3QMY9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Top6blJ3QMY9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Top6blJ3QMY9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Top6blJ3QMY9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Top6blJ3QMY9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Top6blJ3QMY9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Top6blJ3QMY9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Top6blJ3QMY9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Top6blJ3QMY9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Top6blJ3QMY9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top6blJ3QMY9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top6blJ3QMY9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Top6blJ3QMY9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top6blJ3QMY9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top6blJ3QMY9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top6blJ3QMY9 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.84■□□□□ 0.61
Top6blJ3QMY9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top6blJ3QMY9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.84■□□□□ 0.61
Top6blJ3QMY9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.84■□□□□ 0.61
Top6blJ3QMY9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top6blJ3QMY9 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.84■□□□□ 0.61
Top6blJ3QMY9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top6blJ3QMY9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Top6blJ3QMY9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top6blJ3QMY9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top6blJ3QMY9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.84■□□□□ 0.61
Top6blJ3QMY9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.83■□□□□ 0.61
Top6blJ3QMY9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Top6blJ3QMY9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Top6blJ3QMY9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Top6blJ3QMY9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Top6blJ3QMY9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Top6blJ3QMY9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.83■□□□□ 0.6
Top6blJ3QMY9 Gm15378-201ENSMUST00000121894 207 ntBASIC18.83■□□□□ 0.6
Top6blJ3QMY9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Top6blJ3QMY9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Top6blJ3QMY9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.83■□□□□ 0.6
Top6blJ3QMY9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.83■□□□□ 0.6
Top6blJ3QMY9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.83■□□□□ 0.6
Top6blJ3QMY9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Top6blJ3QMY9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Top6blJ3QMY9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.83■□□□□ 0.6
Top6blJ3QMY9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Top6blJ3QMY9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Top6blJ3QMY9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.83■□□□□ 0.6
Top6blJ3QMY9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Top6blJ3QMY9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Top6blJ3QMY9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top6blJ3QMY9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top6blJ3QMY9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top6blJ3QMY9 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.82■□□□□ 0.6
Top6blJ3QMY9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top6blJ3QMY9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top6blJ3QMY9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Top6blJ3QMY9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Top6blJ3QMY9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Top6blJ3QMY9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.82■□□□□ 0.6
Top6blJ3QMY9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.82■□□□□ 0.6
Top6blJ3QMY9 Gm18025-201ENSMUST00000221733 862 ntBASIC18.82■□□□□ 0.6
Top6blJ3QMY9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top6blJ3QMY9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top6blJ3QMY9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top6blJ3QMY9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top6blJ3QMY9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.82■□□□□ 0.6
Top6blJ3QMY9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Top6blJ3QMY9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Top6blJ3QMY9 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.81■□□□□ 0.6
Top6blJ3QMY9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.81■□□□□ 0.6
Top6blJ3QMY9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Top6blJ3QMY9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Top6blJ3QMY9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Top6blJ3QMY9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Top6blJ3QMY9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Top6blJ3QMY9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Top6blJ3QMY9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Top6blJ3QMY9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top6blJ3QMY9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top6blJ3QMY9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top6blJ3QMY9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top6blJ3QMY9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top6blJ3QMY9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top6blJ3QMY9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top6blJ3QMY9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Top6blJ3QMY9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Top6blJ3QMY9 Gm42545-201ENSMUST00000202755 922 ntBASIC18.8■□□□□ 0.6
Top6blJ3QMY9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top6blJ3QMY9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Top6blJ3QMY9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top6blJ3QMY9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Top6blJ3QMY9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Top6blJ3QMY9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Top6blJ3QMY9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top6blJ3QMY9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.79■□□□□ 0.6
Top6blJ3QMY9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Top6blJ3QMY9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Top6blJ3QMY9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms