Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm3139J3QK78 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm3139J3QK78 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Gm3139J3QK78 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm3139J3QK78 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.95■□□□□ 0.46
Gm3139J3QK78 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Gm3139J3QK78 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm3139J3QK78 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Gm3139J3QK78 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm3139J3QK78 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.95■□□□□ 0.46
Gm3139J3QK78 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm3139J3QK78 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm3139J3QK78 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm3139J3QK78 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm3139J3QK78 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gm3139J3QK78 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.94■□□□□ 0.46
Gm3139J3QK78 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Gm3139J3QK78 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm3139J3QK78 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm3139J3QK78 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gm3139J3QK78 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm3139J3QK78 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Gm3139J3QK78 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.94■□□□□ 0.46
Gm3139J3QK78 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.94■□□□□ 0.46
Gm3139J3QK78 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm3139J3QK78 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm3139J3QK78 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.93■□□□□ 0.46
Gm3139J3QK78 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm3139J3QK78 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm3139J3QK78 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.93■□□□□ 0.46
Gm3139J3QK78 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gm3139J3QK78 Gm18025-201ENSMUST00000221733 862 ntBASIC17.93■□□□□ 0.46
Gm3139J3QK78 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.93■□□□□ 0.46
Gm3139J3QK78 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Gm3139J3QK78 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gm3139J3QK78 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm3139J3QK78 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm3139J3QK78 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Gm3139J3QK78 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm3139J3QK78 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm3139J3QK78 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.92■□□□□ 0.46
Gm3139J3QK78 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.92■□□□□ 0.46
Gm3139J3QK78 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm3139J3QK78 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm3139J3QK78 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm3139J3QK78 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm3139J3QK78 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Gm3139J3QK78 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.92■□□□□ 0.46
Gm3139J3QK78 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm3139J3QK78 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm3139J3QK78 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm3139J3QK78 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm3139J3QK78 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm3139J3QK78 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.91■□□□□ 0.46
Gm3139J3QK78 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Gm3139J3QK78 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.91■□□□□ 0.46
Gm3139J3QK78 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.91■□□□□ 0.46
Gm3139J3QK78 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm3139J3QK78 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.91■□□□□ 0.46
Gm3139J3QK78 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm3139J3QK78 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm3139J3QK78 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm3139J3QK78 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm3139J3QK78 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3139J3QK78 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3139J3QK78 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3139J3QK78 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3139J3QK78 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3139J3QK78 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.9■□□□□ 0.46
Gm3139J3QK78 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Gm3139J3QK78 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3139J3QK78 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3139J3QK78 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.9■□□□□ 0.46
Gm3139J3QK78 Gm6576-201ENSMUST00000169678 883 ntBASIC17.9■□□□□ 0.46
Gm3139J3QK78 Mir2861-201ENSMUST00000175539 82 ntBASIC17.9■□□□□ 0.46
Gm3139J3QK78 Gm42545-201ENSMUST00000202755 922 ntBASIC17.9■□□□□ 0.46
Gm3139J3QK78 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Gm3139J3QK78 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3139J3QK78 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3139J3QK78 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3139J3QK78 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3139J3QK78 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3139J3QK78 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.9■□□□□ 0.46
Gm3139J3QK78 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm3139J3QK78 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.46
Gm3139J3QK78 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm3139J3QK78 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm3139J3QK78 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Gm3139J3QK78 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm3139J3QK78 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.89■□□□□ 0.45
Gm3139J3QK78 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm3139J3QK78 Gm43183-201ENSMUST00000200632 547 ntBASIC17.89■□□□□ 0.45
Gm3139J3QK78 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.89■□□□□ 0.45
Gm3139J3QK78 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm3139J3QK78 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm3139J3QK78 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm3139J3QK78 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm3139J3QK78 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Gm3139J3QK78 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm3139J3QK78 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms