Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx1-1G3UXB3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.47■□□□□ 0.87
Nkx1-1G3UXB3 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Nkx1-1G3UXB3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC20.47■□□□□ 0.87
Nkx1-1G3UXB3 Gm2651-201ENSMUST00000203560 838 ntBASIC20.47■□□□□ 0.87
Nkx1-1G3UXB3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx1-1G3UXB3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.47■□□□□ 0.87
Nkx1-1G3UXB3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Nkx1-1G3UXB3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx1-1G3UXB3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.47■□□□□ 0.87
Nkx1-1G3UXB3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.47■□□□□ 0.87
Nkx1-1G3UXB3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx1-1G3UXB3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Nkx1-1G3UXB3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.46■□□□□ 0.87
Nkx1-1G3UXB3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.46■□□□□ 0.87
Nkx1-1G3UXB3 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.46■□□□□ 0.87
Nkx1-1G3UXB3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.46■□□□□ 0.87
Nkx1-1G3UXB3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx1-1G3UXB3 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.46■□□□□ 0.87
Nkx1-1G3UXB3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx1-1G3UXB3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx1-1G3UXB3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.46■□□□□ 0.87
Nkx1-1G3UXB3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx1-1G3UXB3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nkx1-1G3UXB3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nkx1-1G3UXB3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Nkx1-1G3UXB3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx1-1G3UXB3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx1-1G3UXB3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.45■□□□□ 0.86
Nkx1-1G3UXB3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Nkx1-1G3UXB3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx1-1G3UXB3 Gm43438-201ENSMUST00000198133 379 ntBASIC20.45■□□□□ 0.86
Nkx1-1G3UXB3 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx1-1G3UXB3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx1-1G3UXB3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx1-1G3UXB3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx1-1G3UXB3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Nkx1-1G3UXB3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx1-1G3UXB3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx1-1G3UXB3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.44■□□□□ 0.86
Nkx1-1G3UXB3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx1-1G3UXB3 Gm10418-201ENSMUST00000100943 576 ntBASIC20.44■□□□□ 0.86
Nkx1-1G3UXB3 Gm1401-201ENSMUST00000122048 772 ntBASIC20.44■□□□□ 0.86
Nkx1-1G3UXB3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx1-1G3UXB3 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC20.44■□□□□ 0.86
Nkx1-1G3UXB3 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.44■□□□□ 0.86
Nkx1-1G3UXB3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.44■□□□□ 0.86
Nkx1-1G3UXB3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx1-1G3UXB3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx1-1G3UXB3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Nkx1-1G3UXB3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx1-1G3UXB3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx1-1G3UXB3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Nkx1-1G3UXB3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx1-1G3UXB3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Nkx1-1G3UXB3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx1-1G3UXB3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx1-1G3UXB3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx1-1G3UXB3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
Nkx1-1G3UXB3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Nkx1-1G3UXB3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Nkx1-1G3UXB3 Gm14057-201ENSMUST00000120631 482 ntBASIC20.43■□□□□ 0.86
Nkx1-1G3UXB3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx1-1G3UXB3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx1-1G3UXB3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx1-1G3UXB3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Nkx1-1G3UXB3 Gm18363-201ENSMUST00000221671 730 ntBASIC20.43■□□□□ 0.86
Nkx1-1G3UXB3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx1-1G3UXB3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx1-1G3UXB3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx1-1G3UXB3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.43■□□□□ 0.86
Nkx1-1G3UXB3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.43■□□□□ 0.86
Nkx1-1G3UXB3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx1-1G3UXB3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.42■□□□□ 0.86
Nkx1-1G3UXB3 Gm14542-201ENSMUST00000118460 1248 ntBASIC20.42■□□□□ 0.86
Nkx1-1G3UXB3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.42■□□□□ 0.86
Nkx1-1G3UXB3 Auts2-212ENSMUST00000178555 309 ntBASIC20.42■□□□□ 0.86
Nkx1-1G3UXB3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx1-1G3UXB3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.42■□□□□ 0.86
Nkx1-1G3UXB3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx1-1G3UXB3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Nkx1-1G3UXB3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx1-1G3UXB3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.41■□□□□ 0.86
Nkx1-1G3UXB3 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Nkx1-1G3UXB3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.41■□□□□ 0.86
Nkx1-1G3UXB3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.41■□□□□ 0.86
Nkx1-1G3UXB3 AC154828.2-201ENSMUST00000220908 1070 ntBASIC20.41■□□□□ 0.86
Nkx1-1G3UXB3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx1-1G3UXB3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx1-1G3UXB3 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.41■□□□□ 0.86
Nkx1-1G3UXB3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx1-1G3UXB3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx1-1G3UXB3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx1-1G3UXB3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nkx1-1G3UXB3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx1-1G3UXB3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nkx1-1G3UXB3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx1-1G3UXB3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx1-1G3UXB3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx1-1G3UXB3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms