Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cpsf4lE9Q2N0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4lE9Q2N0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4lE9Q2N0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4lE9Q2N0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.25■□□□□ 0.03
Cpsf4lE9Q2N0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4lE9Q2N0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cpsf4lE9Q2N0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4lE9Q2N0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4lE9Q2N0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cpsf4lE9Q2N0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf4lE9Q2N0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Gm27275-201ENSMUST00000184318 272 ntBASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpsf4lE9Q2N0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4lE9Q2N0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4lE9Q2N0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4lE9Q2N0 Gm11249-201ENSMUST00000117071 859 ntBASIC15.23■□□□□ 0.03
Cpsf4lE9Q2N0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4lE9Q2N0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.23■□□□□ 0.03
Cpsf4lE9Q2N0 Mtag2-201ENSMUST00000058665 714 ntBASIC15.23■□□□□ 0.03
Cpsf4lE9Q2N0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cpsf4lE9Q2N0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4lE9Q2N0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cpsf4lE9Q2N0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Cpsf4lE9Q2N0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4lE9Q2N0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cpsf4lE9Q2N0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpsf4lE9Q2N0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cpsf4lE9Q2N0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4lE9Q2N0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.21■□□□□ 0.03
Cpsf4lE9Q2N0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4lE9Q2N0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4lE9Q2N0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cpsf4lE9Q2N0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4lE9Q2N0 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.21■□□□□ 0.03
Cpsf4lE9Q2N0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cpsf4lE9Q2N0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.21■□□□□ 0.03
Cpsf4lE9Q2N0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4lE9Q2N0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4lE9Q2N0 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.21■□□□□ 0.03
Cpsf4lE9Q2N0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpsf4lE9Q2N0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpsf4lE9Q2N0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpsf4lE9Q2N0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Cpsf4lE9Q2N0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpsf4lE9Q2N0 Gm37856-201ENSMUST00000191634 999 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms