Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Usp42B2RQC2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp42B2RQC2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.1■□□□□ 0.97
Usp42B2RQC2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp42B2RQC2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp42B2RQC2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp42B2RQC2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp42B2RQC2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp42B2RQC2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.1■□□□□ 0.97
Usp42B2RQC2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.1■□□□□ 0.97
Usp42B2RQC2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
Usp42B2RQC2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp42B2RQC2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Usp42B2RQC2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Usp42B2RQC2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Usp42B2RQC2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp42B2RQC2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp42B2RQC2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp42B2RQC2 Mir2861-201ENSMUST00000175539 82 ntBASIC21.09■□□□□ 0.97
Usp42B2RQC2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.09■□□□□ 0.97
Usp42B2RQC2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp42B2RQC2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp42B2RQC2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp42B2RQC2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp42B2RQC2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp42B2RQC2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Usp42B2RQC2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp42B2RQC2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp42B2RQC2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp42B2RQC2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp42B2RQC2 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.08■□□□□ 0.97
Usp42B2RQC2 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.08■□□□□ 0.97
Usp42B2RQC2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp42B2RQC2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp42B2RQC2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp42B2RQC2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp42B2RQC2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp42B2RQC2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp42B2RQC2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp42B2RQC2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp42B2RQC2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.08■□□□□ 0.96
Usp42B2RQC2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.07■□□□□ 0.96
Usp42B2RQC2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp42B2RQC2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Usp42B2RQC2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp42B2RQC2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp42B2RQC2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp42B2RQC2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Usp42B2RQC2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp42B2RQC2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Usp42B2RQC2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp42B2RQC2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Usp42B2RQC2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp42B2RQC2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp42B2RQC2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp42B2RQC2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Usp42B2RQC2 Gm13158-201ENSMUST00000122007 736 ntBASIC21.05■□□□□ 0.96
Usp42B2RQC2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp42B2RQC2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.05■□□□□ 0.96
Usp42B2RQC2 Gm10138-203ENSMUST00000206952 366 ntBASIC21.05■□□□□ 0.96
Usp42B2RQC2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp42B2RQC2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp42B2RQC2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
Usp42B2RQC2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp42B2RQC2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp42B2RQC2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Usp42B2RQC2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp42B2RQC2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp42B2RQC2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp42B2RQC2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp42B2RQC2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.05■□□□□ 0.96
Usp42B2RQC2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp42B2RQC2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp42B2RQC2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp42B2RQC2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp42B2RQC2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.04■□□□□ 0.96
Usp42B2RQC2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp42B2RQC2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp42B2RQC2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp42B2RQC2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp42B2RQC2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp42B2RQC2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp42B2RQC2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.03■□□□□ 0.96
Usp42B2RQC2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp42B2RQC2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Usp42B2RQC2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp42B2RQC2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp42B2RQC2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp42B2RQC2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp42B2RQC2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Usp42B2RQC2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.02■□□□□ 0.96
Usp42B2RQC2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp42B2RQC2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp42B2RQC2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp42B2RQC2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp42B2RQC2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp42B2RQC2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Usp42B2RQC2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Usp42B2RQC2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp42B2RQC2 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms