Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a5A6H584 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a5A6H584 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Col6a5A6H584 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a5A6H584 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a5A6H584 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a5A6H584 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a5A6H584 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a5A6H584 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a5A6H584 Gm2756-201ENSMUST00000195851 400 ntBASIC13.64□□□□□ -0.23
Col6a5A6H584 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a5A6H584 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a5A6H584 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a5A6H584 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Col6a5A6H584 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a5A6H584 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Col6a5A6H584 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.63□□□□□ -0.23
Col6a5A6H584 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.63□□□□□ -0.23
Col6a5A6H584 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a5A6H584 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Col6a5A6H584 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a5A6H584 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Col6a5A6H584 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a5A6H584 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a5A6H584 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a5A6H584 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a5A6H584 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col6a5A6H584 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a5A6H584 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC13.63□□□□□ -0.23
Col6a5A6H584 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a5A6H584 Gm23935-201ENSMUST00000102303 57 ntBASIC13.62□□□□□ -0.23
Col6a5A6H584 Gm24270-201ENSMUST00000102326 57 ntBASIC13.62□□□□□ -0.23
Col6a5A6H584 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
Col6a5A6H584 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.62□□□□□ -0.23
Col6a5A6H584 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a5A6H584 Gm24245-201ENSMUST00000157318 57 ntBASIC13.62□□□□□ -0.23
Col6a5A6H584 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a5A6H584 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.62□□□□□ -0.23
Col6a5A6H584 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.62□□□□□ -0.23
Col6a5A6H584 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a5A6H584 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a5A6H584 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Col6a5A6H584 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a5A6H584 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.62□□□□□ -0.23
Col6a5A6H584 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a5A6H584 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC13.62□□□□□ -0.23
Col6a5A6H584 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Col6a5A6H584 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.62□□□□□ -0.23
Col6a5A6H584 Gm15794-201ENSMUST00000120182 631 ntBASIC13.62□□□□□ -0.23
Col6a5A6H584 Gm7638-201ENSMUST00000121348 967 ntBASIC13.62□□□□□ -0.23
Col6a5A6H584 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.62□□□□□ -0.23
Col6a5A6H584 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a5A6H584 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a5A6H584 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC13.62□□□□□ -0.23
Col6a5A6H584 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.62□□□□□ -0.23
Col6a5A6H584 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a5A6H584 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col6a5A6H584 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Col6a5A6H584 Gm5264-201ENSMUST00000190584 848 ntBASIC13.61□□□□□ -0.23
Col6a5A6H584 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.61□□□□□ -0.23
Col6a5A6H584 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a5A6H584 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Col6a5A6H584 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Col6a5A6H584 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a5A6H584 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a5A6H584 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a5A6H584 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a5A6H584 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a5A6H584 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a5A6H584 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Col6a5A6H584 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.61□□□□□ -0.23
Col6a5A6H584 Gm5364-201ENSMUST00000216789 889 ntBASIC13.61□□□□□ -0.23
Col6a5A6H584 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a5A6H584 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.61□□□□□ -0.23
Col6a5A6H584 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a5A6H584 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a5A6H584 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a5A6H584 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a5A6H584 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a5A6H584 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a5A6H584 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Col6a5A6H584 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a5A6H584 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col6a5A6H584 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a5A6H584 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a5A6H584 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a5A6H584 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a5A6H584 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Col6a5A6H584 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.6□□□□□ -0.23
Col6a5A6H584 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.6□□□□□ -0.23
Col6a5A6H584 Gm10576-201ENSMUST00000191927 825 ntBASIC13.6□□□□□ -0.23
Col6a5A6H584 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a5A6H584 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a5A6H584 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Col6a5A6H584 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Col6a5A6H584 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a5A6H584 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.6□□□□□ -0.23
Col6a5A6H584 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.6□□□□□ -0.23
Col6a5A6H584 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.6□□□□□ -0.23
Col6a5A6H584 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms