Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav12-1A0N8R1 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.05■□□□□ -0
Trav12-1A0N8R1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav12-1A0N8R1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav12-1A0N8R1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav12-1A0N8R1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav12-1A0N8R1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav12-1A0N8R1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav12-1A0N8R1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trav12-1A0N8R1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trav12-1A0N8R1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.04■□□□□ -0
Trav12-1A0N8R1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.04■□□□□ -0
Trav12-1A0N8R1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav12-1A0N8R1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-1A0N8R1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-1A0N8R1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.03■□□□□ -0
Trav12-1A0N8R1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-1A0N8R1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-1A0N8R1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-1A0N8R1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav12-1A0N8R1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-1A0N8R1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
Trav12-1A0N8R1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-1A0N8R1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav12-1A0N8R1 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.03■□□□□ -0
Trav12-1A0N8R1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-1A0N8R1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav12-1A0N8R1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.02■□□□□ -0
Trav12-1A0N8R1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav12-1A0N8R1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav12-1A0N8R1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav12-1A0N8R1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.02■□□□□ -0
Trav12-1A0N8R1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav12-1A0N8R1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trav12-1A0N8R1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12-1A0N8R1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12-1A0N8R1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12-1A0N8R1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12-1A0N8R1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12-1A0N8R1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trav12-1A0N8R1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12-1A0N8R1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12-1A0N8R1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12-1A0N8R1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trav12-1A0N8R1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12-1A0N8R1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12-1A0N8R1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15□□□□□ -0.01
Trav12-1A0N8R1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12-1A0N8R1 Gm10129-202ENSMUST00000193100 1316 ntBASIC15□□□□□ -0.01
Trav12-1A0N8R1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav12-1A0N8R1 Gm37194-201ENSMUST00000193092 3031 ntBASIC15□□□□□ -0.01
Trav12-1A0N8R1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav12-1A0N8R1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
Trav12-1A0N8R1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12-1A0N8R1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12-1A0N8R1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12-1A0N8R1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12-1A0N8R1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15□□□□□ -0.01
Trav12-1A0N8R1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 287.4 ms