Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-2A0A140T8N6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-2A0A140T8N6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.55□□□□□ -0.4
Trbv13-2A0A140T8N6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-2A0A140T8N6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-2A0A140T8N6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-2A0A140T8N6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv13-2A0A140T8N6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv13-2A0A140T8N6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Gm35558-201ENSMUST00000222675 2219 ntBASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Gm10602-201ENSMUST00000098239 609 ntBASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trbv13-2A0A140T8N6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv13-2A0A140T8N6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv13-2A0A140T8N6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Trbv13-2A0A140T8N6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.52□□□□□ -0.4
Trbv13-2A0A140T8N6 Fam105a-203ENSMUST00000226170 3043 ntBASIC12.52□□□□□ -0.4
Trbv13-2A0A140T8N6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trbv13-2A0A140T8N6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-2A0A140T8N6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-2A0A140T8N6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trbv13-2A0A140T8N6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-2A0A140T8N6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.52□□□□□ -0.41
Trbv13-2A0A140T8N6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-2A0A140T8N6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-2A0A140T8N6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trbv13-2A0A140T8N6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-2A0A140T8N6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.52□□□□□ -0.41
Trbv13-2A0A140T8N6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-2A0A140T8N6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-2A0A140T8N6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-2A0A140T8N6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-2A0A140T8N6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv13-2A0A140T8N6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.51□□□□□ -0.41
Trbv13-2A0A140T8N6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-2A0A140T8N6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-2A0A140T8N6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-2A0A140T8N6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.51□□□□□ -0.41
Trbv13-2A0A140T8N6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-2A0A140T8N6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-2A0A140T8N6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-2A0A140T8N6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-2A0A140T8N6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.51□□□□□ -0.41
Trbv13-2A0A140T8N6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.51□□□□□ -0.41
Trbv13-2A0A140T8N6 Gm5408-201ENSMUST00000197998 747 ntBASIC12.51□□□□□ -0.41
Trbv13-2A0A140T8N6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-2A0A140T8N6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-2A0A140T8N6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-2A0A140T8N6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv13-2A0A140T8N6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms