Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb8A0A140LI48 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb8A0A140LI48 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb8A0A140LI48 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb8A0A140LI48 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb8A0A140LI48 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb8A0A140LI48 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb8A0A140LI48 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb8A0A140LI48 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb8A0A140LI48 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.25■□□□□ 0.19
Pcdhgb8A0A140LI48 Gm7514-201ENSMUST00000209475 934 ntBASIC16.25■□□□□ 0.19
Pcdhgb8A0A140LI48 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb8A0A140LI48 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdhgb8A0A140LI48 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb8A0A140LI48 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhgb8A0A140LI48 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb8A0A140LI48 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhgb8A0A140LI48 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Gm29257-201ENSMUST00000186115 639 ntBASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhgb8A0A140LI48 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhgb8A0A140LI48 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhgb8A0A140LI48 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb8A0A140LI48 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb8A0A140LI48 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb8A0A140LI48 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb8A0A140LI48 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb8A0A140LI48 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb8A0A140LI48 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pcdhgb8A0A140LI48 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb8A0A140LI48 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb8A0A140LI48 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pcdhgb8A0A140LI48 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb8A0A140LI48 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.21■□□□□ 0.19
Pcdhgb8A0A140LI48 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms