Protein–RNA interactions for Protein: A0A0U1RP08

1700028J19Rik, RIKEN cDNA 1700028J19 gene (Fragment), mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700028J19RikA0A0U1RP08 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 Gm8495-201ENSMUST00000188740 694 ntBASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
1700028J19RikA0A0U1RP08 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
1700028J19RikA0A0U1RP08 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
1700028J19RikA0A0U1RP08 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
1700028J19RikA0A0U1RP08 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.92■□□□□ 0.3
1700028J19RikA0A0U1RP08 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
1700028J19RikA0A0U1RP08 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
1700028J19RikA0A0U1RP08 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
1700028J19RikA0A0U1RP08 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
1700028J19RikA0A0U1RP08 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
1700028J19RikA0A0U1RP08 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
1700028J19RikA0A0U1RP08 Gm42569-201ENSMUST00000200539 472 ntBASIC16.92■□□□□ 0.3
1700028J19RikA0A0U1RP08 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
1700028J19RikA0A0U1RP08 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
1700028J19RikA0A0U1RP08 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
1700028J19RikA0A0U1RP08 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
1700028J19RikA0A0U1RP08 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
1700028J19RikA0A0U1RP08 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
1700028J19RikA0A0U1RP08 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
1700028J19RikA0A0U1RP08 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
1700028J19RikA0A0U1RP08 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
1700028J19RikA0A0U1RP08 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
1700028J19RikA0A0U1RP08 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
1700028J19RikA0A0U1RP08 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.91■□□□□ 0.3
1700028J19RikA0A0U1RP08 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
1700028J19RikA0A0U1RP08 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
1700028J19RikA0A0U1RP08 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
1700028J19RikA0A0U1RP08 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
1700028J19RikA0A0U1RP08 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
1700028J19RikA0A0U1RP08 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
1700028J19RikA0A0U1RP08 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.91■□□□□ 0.3
1700028J19RikA0A0U1RP08 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Gm7291-201ENSMUST00000199147 382 ntBASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
1700028J19RikA0A0U1RP08 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
1700028J19RikA0A0U1RP08 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
1700028J19RikA0A0U1RP08 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
1700028J19RikA0A0U1RP08 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.89■□□□□ 0.29
1700028J19RikA0A0U1RP08 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.89■□□□□ 0.29
1700028J19RikA0A0U1RP08 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
1700028J19RikA0A0U1RP08 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
1700028J19RikA0A0U1RP08 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
1700028J19RikA0A0U1RP08 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
1700028J19RikA0A0U1RP08 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
1700028J19RikA0A0U1RP08 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
1700028J19RikA0A0U1RP08 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
1700028J19RikA0A0U1RP08 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.88■□□□□ 0.29
1700028J19RikA0A0U1RP08 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
1700028J19RikA0A0U1RP08 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
1700028J19RikA0A0U1RP08 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
1700028J19RikA0A0U1RP08 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
1700028J19RikA0A0U1RP08 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
1700028J19RikA0A0U1RP08 Gm6211-202ENSMUST00000167849 925 ntBASIC16.88■□□□□ 0.29
1700028J19RikA0A0U1RP08 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
1700028J19RikA0A0U1RP08 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
1700028J19RikA0A0U1RP08 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
1700028J19RikA0A0U1RP08 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
1700028J19RikA0A0U1RP08 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
1700028J19RikA0A0U1RP08 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
1700028J19RikA0A0U1RP08 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
1700028J19RikA0A0U1RP08 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
1700028J19RikA0A0U1RP08 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
1700028J19RikA0A0U1RP08 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms