Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm27454-201ENSMUST00000185090 204 ntBASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Gm6139-201ENSMUST00000079261 882 ntBASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav13d-4A0A0G2JFX3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Gm43017-201ENSMUST00000198296 752 ntBASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Gm45417-201ENSMUST00000209533 758 ntBASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms