Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 Gm4968-201ENSMUST00000071458 858 ntBASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Gm2399-201ENSMUST00000104944 225 ntBASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Fst-202ENSMUST00000223640 2612 ntBASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9-4A0A0B4J1K2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9-4A0A0B4J1K2 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav9-4A0A0B4J1K2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Gm12441-201ENSMUST00000121806 588 ntBASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms