Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav4-3A0A0B4J1K1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-3A0A0B4J1K1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gm7860-201ENSMUST00000121190 879 ntBASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav4-3A0A0B4J1K1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4-3A0A0B4J1K1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-3A0A0B4J1K1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms