Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.41■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.41■□□□□ 0.54
Igkv5-43A0A0B4J1J2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.41■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv5-43A0A0B4J1J2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv5-43A0A0B4J1J2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.4■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.4■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Igkv5-43A0A0B4J1J2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.4■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.4■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.4■□□□□ 0.54
Igkv5-43A0A0B4J1J2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.4■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.4■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv5-43A0A0B4J1J2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv5-43A0A0B4J1J2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.39■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Mir6982-201ENSMUST00000184354 68 ntBASIC18.39■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.39■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.39■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Fst-202ENSMUST00000223640 2612 ntBASIC18.38■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Gm37055-201ENSMUST00000191866 133 ntBASIC18.38■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Gm21814-202ENSMUST00000203277 873 ntBASIC18.38■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.38■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.38■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv5-43A0A0B4J1J2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.37■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Gm13401-201ENSMUST00000117074 291 ntBASIC18.37■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv5-43A0A0B4J1J2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms