Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv19A0A0B4J1H4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv19A0A0B4J1H4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv19A0A0B4J1H4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv19A0A0B4J1H4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trbv19A0A0B4J1H4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv19A0A0B4J1H4 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.46□□□□□ -0.09
Trbv19A0A0B4J1H4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv19A0A0B4J1H4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv19A0A0B4J1H4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv19A0A0B4J1H4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trbv19A0A0B4J1H4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.46□□□□□ -0.09
Trbv19A0A0B4J1H4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv19A0A0B4J1H4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv19A0A0B4J1H4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv19A0A0B4J1H4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.46□□□□□ -0.09
Trbv19A0A0B4J1H4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trbv19A0A0B4J1H4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv19A0A0B4J1H4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv19A0A0B4J1H4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv19A0A0B4J1H4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trbv19A0A0B4J1H4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv19A0A0B4J1H4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv19A0A0B4J1H4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv19A0A0B4J1H4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv19A0A0B4J1H4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv19A0A0B4J1H4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv19A0A0B4J1H4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv19A0A0B4J1H4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trbv19A0A0B4J1H4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.45□□□□□ -0.1
Trbv19A0A0B4J1H4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv19A0A0B4J1H4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv19A0A0B4J1H4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv19A0A0B4J1H4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv19A0A0B4J1H4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Trbv19A0A0B4J1H4 Gm5874-201ENSMUST00000096101 508 ntBASIC14.45□□□□□ -0.1
Trbv19A0A0B4J1H4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trbv19A0A0B4J1H4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv19A0A0B4J1H4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv19A0A0B4J1H4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv19A0A0B4J1H4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv19A0A0B4J1H4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms